Manis javanica (Malayan pangolin): 108408316
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Entry
108408316 CDS
T06054
Symbol
WIPI2
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 2 isoform X3
KO
K17908
autophagy-related protein 18
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04136
Autophagy - other
mjv04140
Autophagy - animal
mjv05010
Alzheimer disease
mjv05014
Amyotrophic lateral sclerosis
mjv05016
Huntington disease
mjv05017
Spinocerebellar ataxia
mjv05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
108408316 (WIPI2)
04136 Autophagy - other
108408316 (WIPI2)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
108408316 (WIPI2)
05014 Amyotrophic lateral sclerosis
108408316 (WIPI2)
05016 Huntington disease
108408316 (WIPI2)
05017 Spinocerebellar ataxia
108408316 (WIPI2)
05022 Pathways of neurodegeneration - multiple diseases
108408316 (WIPI2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mjv04131
]
108408316 (WIPI2)
03029 Mitochondrial biogenesis [BR:
mjv03029
]
108408316 (WIPI2)
Membrane trafficking [BR:
mjv04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
108408316 (WIPI2)
Mitochondrial biogenesis [BR:
mjv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108408316 (WIPI2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
DUF7165
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_VPS8
BCAS3_WD40
RMC1_N
VID27
Motif
Other DBs
NCBI-GeneID:
108408316
NCBI-ProteinID:
XP_017533751
LinkDB
All DBs
Position
10:28696980..28723192
Genome browser
AA seq
436 aa
AA seq
DB search
MNLASQSGEAGAGQLLFANFNQDNTSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI
VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVRLNRQRLIVCLEESLY
IHNIRDMKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMI
PAHDSPLAALAFDATGTKLATASEKGTVIRVFSIPEGQKLFEFRRGVKRCVSICSLAFSM
DSMFLSASSNTETVHIFKLETVKEKPQEEPTTWTGYFGKVLMASTSYLPSQVTEMFTQGR
AFATVRLPFCGHKNICSLATIQKIPRLLVGASDGYLYMYNLDPQEGGECTLMKQHKLDGS
METTNEILDSASRDCPLVTQAYGTAAARGAHVPSSPTRLAHVDELGAAGGACLEDEASAL
RLEEDSEHPPMILRTD
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacctggctagtcagagcggcgaggccggcgccggccagctgctcttcgccaacttc
aaccaagacaacacgtccctagctgttggtagtaagtccggttataaatttttctccctt
tcttctgtggataagctggaacagatctatgaatgcactgatactgaagatgtgtgcatc
gtggaaagattgttctcaagcagcttagtggccattgtgagcctcaaagctcctaggaag
ctaaaagtctgccactttaagaaaggcacggagatctgcaactacagctactccaatacc
atcctggccgtgaggctcaaccggcagaggctgatagtgtgcttggaggagtctctctac
atacacaatattcgggacatgaaagtgctgcatacgatccgggagacacccccaaaccct
gcaggcttgtgtgcactgtccataaacaatgacaactgttacctggcgtatccaggcagt
gcaaccatcggagaggtgcaggtcttcgacaccattaacctgagagctgccaacatgatc
ccagctcatgacagtcctttagcagcactggccttcgacgccactggaaccaagcttgct
actgcatctgagaaggggactgtgattagagtattttccattccagagggacaaaaactc
tttgagttccggagaggagttaagaggtgtgtgagcatctgctccttggccttcagcatg
gacagcatgttcctctcggcctccagcaacactgagactgtgcacatcttcaagctcgag
actgtgaaggaaaagcctcaggaggagcccaccacctggaccgggtactttgggaaagtg
ctcatggcctccaccagctacctgccgtcccaagtgacagaaatgttcacccagggccga
gcctttgccacagtccgcctgcccttctgtggccacaaaaatatctgttcgctagccaca
attcaaaagattccccgattactggtgggagcttccgacgggtacttatacatgtacaac
ctggacccccaggaagggggcgagtgcactctcatgaagcagcacaagttggatggcagc
atggagacgaccaacgagatcttagactccgcctcgcgggactgtcccttagtgacccag
gcctacggcacagctgctgccagaggggctcacgtgccttcgtctcccacgaggcttgcc
cacgtagatgagctgggggcagcaggtggcgcttgtctggaagatgaggccagcgccctg
cggctggaggaggacagtgagcatcctcccatgattctgcgaacagattga
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