Manis javanica (Malayan pangolin): 108408706
Help
Entry
108408706 CDS
T06054
Symbol
NPHP4
Name
(RefSeq) nephrocystin-4 isoform X1
KO
K16478
nephrocystin-4
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mjv03037
]
108408706 (NPHP4)
Cilium and associated proteins [BR:
mjv03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
108408706 (NPHP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
Ig_NPHP4_1st
NPHP4_C2_2nd
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
108408706
NCBI-ProteinID:
XP_073089187
LinkDB
All DBs
Position
4:complement(4167211..4294751)
Genome browser
AA seq
1443 aa
AA seq
DB search
MKDWHRIFEQNMLVPLHPQRARQPLKESTAFQCVLKWLDGPLIKQGVLDVLLDAGCHLRV
SLFDVSYRHFFGRTWRSTVRPAEQLSQQPPRVIFNESLYFHTSLNHPNIVAVVEVVIEGR
KRDGTLQTLSCGFGILRIFSNNPESPTSASQDKRLRLYHGTPRALLHPLLQDPIEQNKHM
TLMENCSLQYTLKPHPLLEPAFHLLPENLLVSGLQQIPGLLEAHGENGDALRKPRLQKSV
TWHLDDVFFTLYPSLERFEQELLELLISDHFREGDGLPDGSALDILERRLCVGVHNGLGF
VQRPQVVVLVPEMAVALTRSASFNRKVGSSSKASPGNQALVLRSHLRLPEMVCHPAFAVV
FQLEYAFSSPSGVGSNAALATSPSSVACMHTVRWAVWNPSLEASSGRVTLPLQGGTRPNP
SRCLVYRVPPAGMSSEEVKQVESGTVQFQYSLSSEGHLDTPTGGVSSPKALRPSGKPSTS
PSSPPASSRQGRAVLQDSPVGPGLSLSQLAASPRSPARCHSRRPSQQPLGSEPAPAQAGF
PVEGRLSHLEVDLSHMPLVPGTCVVEQLQELPFTPMHAPIIAGTQTRSSGRKPSRASMVL
LQSSGFPEILDANKQPAEAVNPADGVKFDPQKEESDRLQSNEIVLQFLAFSRVPQDGREA
PWPHTVYFTFQFYRFPPTVTPRLQLVELDAAGKAGLGALSRLLVPIDKDGSCDGGSAGFQ
LKYLVDPGFLKPGEQRWFARYLAAQTLQIDVWDGDSLLLIGSAAVPMKHLLRQGRPAVQV
SYELEVVATEYEQDTMVLSGDVTPFGSVKPIGVYTVVKGRLHLTLANVGHMCEQRGGNSS
SLPPSRSRVISNDGDSRFEGGSLLTRGGPRSAKNVVQAQKLADVDSELAAMLFTHTHLGS
KGPPGAGREVDAVRRRKLERMRSVRLQEARGELGCRRTSVVVRALTDARFPRRLCLGPGV
LAQQSICAQHSRGLQVIAAYRERTKAENIARVLSLAITKEHTVYATLGTAEFFEFELRNP
HNTQHTVTIEMDNPELSIVVDSQEWRYFKEAANLHTPVEEDMFHLQGGLAPRLFLRPRET
AHIPFKYQTFSAGQGSAELRCEKGADAGSPGKPTTVPTKHAKVLFRGSGGKPMAVLCLTV
EPQPHVVDQVFRFYHPELTFLKKAIRLPPWHTLPGVPVGTPGSEPPVHVRCSDPNVICET
HSVGPGEPRDVFLKVASGPSPEIKDFFITIYTDRWLATPLQIWQVHLHSLQRVDVACVTG
QWTRLSLVLRGTQAVRKVRAFTSHPQELMTDPKGVFVLPPHGVQDLHVGVRPLRAGSRFL
HLNLVDVDFHQLVASWLVCLSCRLPLISKAFEIKLAAGEGQGANKRITYTNPYPTRRTFH
LHSDHPDLLQFKEDSFQVEGGETYTIGLRFAPCQRAGVKEILIYINDHEDKNEETFCVKV
TYQ
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactggcacaggatttttgagcaaaatatgctggtccctctccacccacagaga
gcacgccaacctttaaaggaatcgacagcatttcagtgtgtcctgaagtggcttgatggg
ccactaattaagcagggagtgctggacgtgctgttggacgcaggctgccacctgcgagtg
tctctctttgatgtctcctaccgccacttctttgggaggacgtggaggagcacggtgagg
ccagcggagcagctctcccagcagccgccccgggtcatcttcaatgagtccttgtatttt
cacacgtccttaaaccaccctaacatcgtggctgtcgtagaagttgtcatcgaaggcaga
aagcgggatgggaccctccaaactttgtcttgtgggtttggaattcttcggatcttcagc
aacaacccggaatctcctacctcggcctcccaggacaaacggttgagactgtatcatggc
acccccagagctctgctgcacccacttctccaggatcccatagaacaaaacaagcacatg
accctcatggagaactgcagcctgcagtataccctgaagccgcacccgctcctggagcct
gccttccaccttcttcccgagaaccttctggtgtctggtctgcagcagatacctggcctc
ctggaagctcacggagaaaatggagatgccctccgcaagcctcgcctccagaagtctgtc
acatggcacttggatgacgtgttcttcacgctgtacccttcccttgagagatttgagcag
gagcttctggagctgctcatcagtgatcacttccgggagggggacggcctgccggacggc
agtgccctggacatcctggagcggcgcctgtgtgtgggtgtgcacaacggtctgggcttc
gtgcagaggccgcaggtggtggtgctcgtacctgagatggcagtggccttgacgcgttct
gctagcttcaacaggaaggttggctcctcttcgaaggccagccctgggaaccaggctctg
gttctgagaagccacctccgactgcctgagatggtctgccaccccgcgttcgccgtcgtc
ttccagctggagtacgcgttcagcagcccgtcaggagtgggcagcaacgcggctttggcc
acctctccgtccagcgtggcgtgtatgcacacagtccgctgggctgtttggaacccctcg
ctggaagccagctctgggagggtgaccttacctctgcagggtgggacccggcccaacccc
tcccgctgtctggtctacagggtgcccccagctggcatgagctctgaagaggtgaagcag
gtggagtcggggacagtccagttccagtactcgctgagctctgaaggacacctggacaca
cccacagggggtgtcagcagccccaaggcacttcggccctctgggaagccatccacgtcc
ccttcaagcccgccagcgtcatcccgccaggggcgtgccgtcctccaggactcgcctgtg
ggaccagggctgtcactttcccagctggcggcctcccctcggtccccagctcggtgccac
tccaggcgcccctcccagcagcccctcggctctgagcccgccccggcccaggcggggttc
cctgtggagggcaggctgtctcatctggaagtcgacctgagccacatgcccttggtcccg
ggaacgtgtgtggtcgagcagttgcaggagctgccattcacacctatgcatgccccgatc
atcgcgggaacccagaccaggagctctggaaggaagccctcacgagcctcaatggtgctc
ctgcagtcctccggctttcctgagattctggatgccaataagcaaccagccgaggctgtg
aatcctgcagatggtgtgaaattcgaccctcaaaaggaagagtcagatcgtctacaaagc
aacgaaatcgtgctgcagtttcttgcctttagcagagtgccccaggacggccgggaagcg
ccgtggccgcacaccgtgtacttcaccttccagttctaccgcttcccgcccacggtcacg
ccgcggctgcagctggtggagctggacgcggcggggaaggccggcttgggcgccctgtcg
cgtctcctcgtgccgattgacaaggacggctcctgtgatggcggttctgctggctttcaa
ctgaagtacctggtggatcctggattcctgaagcccggagagcagcgctggttcgcccgc
tacctggcagcgcagaccctacagatcgacgtgtgggatggggattcgctgcttctcatc
gggtctgcagccgtcccgatgaagcatctcctccgccaggggcggccagccgtgcaggtc
tcatatgagctcgaggtcgtggctactgagtatgagcaggacacaatggtgctgagtgga
gatgtgaccccatttggcagtgtcaagcccatcggcgtgtacacggtggtgaagggccgg
ttgcacctgaccttggccaatgtgggtcacatgtgtgaacagagagggggaaattccagc
tcgttgccgccttccaggtcacgggtcatctcgaatgatggagacagccgcttcgaggga
ggcagcctgctcactcgagggggccctagatcagcaaaaaatgtggtccaagcgcagaag
ctggcagatgtggatagcgagctggccgccatgctgttcacccacacccatctggggagc
aaggggcccccgggtgccggccgcgaggtggatgctgtccgcaggcgcaagctggagcgg
atgaggtccgtgcgtctgcaggaggccagaggggagctcggctgccggaggactagcgtg
gtggtgagggccttgaccgatgcgcgcttccccaggcgtctctgtctgggaccaggcgtc
ctcgcccagcagagcatctgtgcacagcactcgaggggcctgcaggtcattgccgcctac
cgggagcgcacgaaggccgagaacatcgccagggtgctgagcctggccatcaccaaggag
cacacggtctatgccacgctgggcaccgccgagttcttcgagttcgagctcaggaacccc
cacaacacacagcacacggtgaccattgagatggacaaccccgagctcagcatcgtcgtg
gacagccaggagtggaggtacttcaaggaggcggccaacctgcacacgccggtagaggag
gacatgttccacctgcagggcggcctcgcccctcggctcttcctgcgccccagggagact
gcccacatccccttcaaataccagaccttctctgcgggtcagggctccgctgagctgagg
tgtgagaagggtgcagacgccgggtcacctgggaagcccactacagtgcccactaagcat
gccaaggtcttgttccgcgggagtggtggcaagcccatggccgtgctctgcctgacggtg
gaaccccagccccacgtggtggaccaggtcttccgcttctaccacccagagctcaccttc
ctgaagaaggccatccgcctgcctccctggcacacgcttccaggtgttcccgtggggacg
cccggctcagagcccccggtccacgtccgatgcagcgacccaaatgtcatttgtgagacc
cacagtgtgggccccggggagccgcgggacgtgttcctgaaggtggctagtggtcccagc
ccagagatcaaagacttcttcatcaccatttacacggaccgctggctggcgacacccctc
cagatatggcaggtccacctgcactccctgcagcgtgtggatgtcgcctgtgtcacaggc
cagtggacccgcctgtccctcgtcctccgggggacacaggcggttaggaaagtgagagca
ttcacctcgcacccccaggagctgatgacggaccccaagggcgtctttgtgctgcccccc
cacggggtgcaggacctgcacgtgggcgtgcgcccgctcagggcgggcagccggttcctc
cacctcaacctggtcgacgtggacttccaccagctggtggcctcgtggctcgtgtgcctt
tcctgccgcctgcctctcatttccaaggcctttgagatcaagctggccgccggggaaggt
cagggcgccaacaagcggatcacctacaccaacccctaccccacccggaggactttccac
ctgcacagtgaccaccccgacctgctgcagttcaaggaggactccttccaggttgagggg
ggagagacctacactattggcctgcggtttgcaccatgtcagagagctggggtgaaggag
attctgatctacatcaacgaccacgaagacaaaaatgaagaaacgttttgcgtgaaggtc
acctaccagtga
DBGET
integrated database retrieval system