Manis javanica (Malayan pangolin): 108408762
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Entry
108408762 CDS
T06054
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108408762 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108408762 (CNOT6)
Enzymes [BR:
mjv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
108408762 (CNOT6)
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
108408762 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
108408762 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
108408762
NCBI-ProteinID:
XP_036857931
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MPKEKYEPPDPRRMYTIMSSEEAANGKKSYWAELEISGKVRSLSSSLWSLTHLTALHLSD
NYLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYLEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIISLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAILLELREELIEMSSGKPHLGAEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRSLQSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCNGKRGTTNGRITHGFRLKSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaaatacgagccccctgaccctcggaggatgtacacaattatgtcctct
gaggaagcagcaaacggaaagaaatcatattgggcagagcttgaaataagtggaaaagtc
agaagcctaagctcatctttgtggtcactgactcacttgacagctttgcatctgagtgac
aactacctgtcccgcatcccttcagacattgccaagcttcacaatctggtgtatctggac
ttgtcctctaataaaatccggagtttaccagcagaactcggaaacatggtatcactcagg
gaactccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccacttacccaggatatactgaacctctat
ctggaaccagatggaacaagaaggctactgaactacttgcttgataatttggcaggtact
gcaaaaagaatttcaacagaacagccacctccaagatcgtggattatgttacaagaacca
gacagaacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcatgggcactaaattgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatatcataagtcttcaggag
gttgaaacagaacagtattacagtttttttctggtagaactgaaagaacgtggctataat
ggattctttagtcctaaatctagagctaggacaatgtcagaacaagaaagaaaacatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaagcacactgtt
gaatttaatcagctagcaatggcgaattcagaagggtctgaagctatgctgaacagagtc
atgacgaaagacaacattggagttgcgatactgctagaacttcgggaggaattgattgaa
atgtcatctggaaagccacatcttggagcagaaaaacaacttattctcgtggctaatgcg
catatgcattgggaccctgaatactccgatgtgaagttggttcaaaccatgatgttcctc
tcagaagtgaagaacattattgataaagcctctcgaagcctccagtccagtgtattggga
gaatttggaactattccactggtgttatgtgcagatcttaattctttgcctgactctggt
gttgtagaatatttgagcacaggtggagtagaaacaaatcataaggactttaaggaactg
agatacaatgaaagtcttaccaacttcagctgtaatgggaaacgcgggacgaccaacgga
aggattactcatggtttcaggttaaagagcgcctacgagagcggcctaatgccttacacc
aactacacgtttgacttcaagggtataattgactacatcttctactctaaacctcagctg
aacactttaggcatcctgggacctctggaccaccattggctagttgagaataatatcagc
ggctgcccacacccactcattccctctgaccacttctcactttttgcacaactggagctc
ttactgcccttcctgccccaggtcaatggcattcaccttcctggcaggaggtag
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