Manis javanica (Malayan pangolin): 108409149
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Entry
108409149 CDS
T06054
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2 isoform X1
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03082
ATP-dependent chromatin remodeling
mjv05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
108409149 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
108409149 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mjv03000
]
108409149 (ARID2)
03021 Transcription machinery [BR:
mjv03021
]
108409149 (ARID2)
03036 Chromosome and associated proteins [BR:
mjv03036
]
108409149 (ARID2)
Transcription factors [BR:
mjv03000
]
Eukaryotic type
Helix-turn-helix
ARID
108409149 (ARID2)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
108409149 (ARID2)
Chromosome and associated proteins [BR:
mjv03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
108409149 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
FOXP-CC
Motif
Other DBs
NCBI-GeneID:
108409149
NCBI-ProteinID:
XP_036865393
LinkDB
All DBs
Position
Unknown
AA seq
1818 aa
AA seq
DB search
MANSTGKTPPDERRKGLAFLDELRQFHHSRGSPFQKVPAVAGKALDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEEDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTPGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDAACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAVEQVQTQTHVASAPASRAAVGQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEEPSSSGQAHIHVVGVR
RRAIPLPVQVYCQQQPASAPALRVDSVPDVSPSPSPAGIPPGPQTVGNHFPRTSVINQSS
NVTSTQRSFPAQGVHPAAQTVSRIPPNPSVNTHSPHSVPVAVIQNKAPVPCELIQATVLP
SSTPQTTGPVGIAVGSGAAQSPVVQAQGPGPQPVAVVNSQALLPHPSMLPQQPPLHTVVP
GQIPSGAPLAVIQPAVPQSHLFGRVQNMPACAPAGSQGQQLVATSPQPVQASSQQMPAGS
QPQDTVLIAPPQYVTTSASSIVPAPPVQNFQVAAGQMVAIAGLPSPQPARVGFQNIAPKP
LPPQQGASVGTQQPVPQPQQPPQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLAGQANVTPSSSPSPVPAPSTPGPAAVPSSTPQSQGPPPTVSQMLSAKRQHSPAPPQQV
PAQVQPQPAGAGLGQPASAESSLIKQLLLPKRGPSTPGGKLILPAPQIPPPSSARAPSPQ
VVYQVANSQAAGFGVQGQPPAQQLLVGQQNVQLVQSAMPPTGGVQTVPISNLQILPGPLI
SNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNAAQLIAPAGITVSGAPVGVGLQAPP
PAPHASPAGQSSCVSATPPFRGDKIICQKEEEAKEATGLHVHERKIEVMENPSCRRGTAS
TSNGDTKENTVQAGGLLNGRKYSDSSLPPPNSGKGHGETNPCSLVSNGPSLELGENGTAG
RQNSEQMDMQDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHKTSNHVGNGEISPVEPQG
TPDATQQDTAKGDQRDRISNGPVFAWSGSPSVSGVQDAPGVAPLQIGGTDLPNGPLAPSS
NSDVPQQRPSVVVSPHSTDPVIQGHQITAVPHPGSRGPHSPALAPDLRAANGTADSKTVK
RPAEDNERETVPGVPNKVGVRIVTISDPNNAGCSATMVAVPAGADPSTVAKAAIESAAQH
KPQPPAYVQSVAAQNTPVAPPAAVQVQSQPHGSQPPPFSASSPHRDPVRKPGHNFMCLWQ
SCKKWFQTPSQVFFHAATEHGGKDAYPGQCLWEGCEPFQRQRFSFITHLQDKHCSKDALL
AGLKQDEPGQAGSQKPSTKQPAAVGAGPTPRAQKAIVNHPSAALMALRRGSRNLVFRDFT
DEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENSLSALAISNMEASSTLAKCLYE
LNFTVQSKEQDKDSEMLQ
NT seq
5457 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaagacgcctccggacgagcggagaaaggggctcgcgttcctg
gacgagctgcggcagttccaccacagccgagggtcgccgtttcagaaggtccccgcggtg
gccgggaaggcgctggacctgcacgggctctacacccgagtcactactttgggcggcttc
gcgaaggtttcggagaagaaccagtggggagaaatcgtggaggagttcaactttcccaga
agttgctccaacgctgcctttgccttgaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggaggatgatgaggtcccaccaggcaatccgaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ctggtgctctcactgttatctggactcccaaatgaagtggactttgctattaatgtgtgc
actctcctgtcaaatgagagcaagcatgtcatgcaacttgaaaaagaccctaaaatcatc
actttgttacttgctaacgccggggtgtttgacgacactttaggatccttttctactgta
tttggagaagaatggaaagagaagactgatagagattttgttaagttttggaaagacatt
gttgatgacaatgaagtacgtgacctcatttctgacagaaacaagtcccatgagggtaca
ccaggagagtggatttgggaatctttatttcacccacctcggaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaacctttcctttgaggag
ggcaatgttaagcttttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacaccttaggaaatattgcagct
gagcttttattggaccctgttgatttcaaaactactcacctaatgtttcatactgtaaca
aaatgtctcatgtcaagggacagatttctaaagatgcggggtatggaaattttggggaat
ctttgcaaagcagaggacaatggtgttttgatttgtgagtatgtcgaccaggactcatac
cgggagatcatttgccatctcactctgcccgacgtgctgctggtgatctcaacactcgag
gtgctctacatgctcacagaaatgggagatgctgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgttcggccctgat
gcactagctgcagtaaagctcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctgtagagcaagtccaaacccagacccatgtagcatctgccccagct
tccagagcagctgtaggacagcacgtcgctccacctccaggaatagtggaaatagatagc
gagaagtttgcgtgccagtggctaaatgctcatttcgaagtaaatccagattgttctgtt
tctcgagcagaaatgtattctgagtacctttcaacttgtagtaaattagctcgtggtgga
atcctcacatcaactggattttataaatgtcttagaacggtctttccaaatcacaccgtg
aagagagtagaggagcccagcagcagcgggcaggcgcacattcacgtggtgggagtcagg
cggcgggccatcccgctccccgtgcaggtgtactgccagcagcagccggcgtctgccccg
gccctgcgtgtcgattctgttcctgatgtatctcccagcccttcacctgcaggaatccct
cctggaccacagactgtaggaaaccactttccgaggacttccgttatcaaccagtcttca
aacgtgacctcaacacaaaggtcttttccagcacaaggcgttcatcccgcggcgcagact
gtttcaagaattcctccaaatccttcagttaatacccactcgccgcacagtgtgccggtg
gctgtcattcagaacaaagctccagtcccttgtgaactcatccaggcgacagtactcccg
agctccacgccgcagacgacgggtcctgtcggtattgccgtgggcagcggggctgcacag
agccctgtggtccaggctcagggcccaggcccgcagcctgttgcggtcgtaaactcccag
gcgctgcttccccacccctccatgctgccccagcagcctccattgcacacggtggtcccg
ggacagattccgtctggggcccccctcgcggttattcagccagctgtcccgcagagtcac
ctgttcggccgagtacagaacatgcctgcgtgcgctcctgcgggctcacagggccagcaa
ttagtcgccacgtcaccgcagcccgttcaggcttcgtctcagcagatgccggcgggcagc
cagccgcaagacacggtcctcatagcacccccccagtacgtgacgacgtctgcttccagt
attgtccccgcacctccagtgcagaatttccaggtagccgcgggacagatggtggccatc
gctgggctcccgagcccacagcccgcgagggtgggctttcagaacatcgcccccaagccc
ctccctcctcagcagggtgcttccgtggggacgcagcagcccgtcccgcagccgcagcag
cccccccagcagagcgtcgtgatcgtgagccagccagctcagcagggccagacctacgca
ccagccattcaccagatcgttcttgcgaatccagcagcgcttccagccgggcagaccgtt
cagctggcaggacaagcaaacgtgaccccctcttcttcaccgtcgcctgtcccagctccc
agtaccccaggccctgctgccgtgccgtcttccaccccacagtcgcaggggccgcccccg
accgtcagccagatgctgtctgcgaagaggcagcactcccccgcgcccccgcagcaggtc
ccggcgcaggtgcagccgcagccggcaggcgcaggcctcgggcagcctgcttctgcggag
tcgagtctgataaagcagctgctgctcccaaagcgtgggccctccaccccgggcggcaag
ctcattctcccggccccacagatccctccgcccagcagcgcgagggcacccagccctcag
gtggtgtaccaggtggccaacagccaggcggcaggtttcggggtgcaggggcagcctcca
gctcagcagctcctggttgggcaacagaatgttcagttggtccaaagtgcaatgccgccc
acaggcggggtgcaaaccgtgcccatctcgaacttacaaatactgccaggcccactgatc
tcaaatagtccggcgaccattttccaggggacttcgggcaaccaggtcaccataacagtt
gtgccaaatacaagttttgcaactgcaactgtcagtcagggaaacgcagctcagctgatc
gcccctgcggggatcacggtgagtggggcgccggtgggggtggggctgcaggcgcccccg
ccggccccccacgcatctccggccggacaatcgtcttgcgtttctgctactcccccgttc
cgaggtgacaaaataatttgccaaaaggaggaggaagcgaaggaagcaacaggtttgcac
gttcacgaacgtaaaatcgaagtcatggagaacccttcctgcagacgaggcaccgcgagc
accagcaatggggacacaaaggaaaacacagtgcaggcggggggcctcttgaatgggaga
aagtacagtgactcaagtctacctcctccaaactcagggaaaggtcacggtgagactaat
ccatgctcactggtcagtaatgggccatcgctagaactgggtgagaacgggacagccgga
agacagaactcagaacagatggacatgcaggatatcaaaagtgatttgaaaaaacctcta
gttaatggaatctgtgattttgataaaggagatggttctcatttaagcaaaaacattcca
aatcacaaaacttccaaccatgtagggaatggtgagatatctccagtggaaccacagggg
actccagatgccactcagcaagatactgccaaaggtgatcagcgagacaggatctctaat
gggcccgtgttcgcctggagcggctccccgtctgtgagcggcgtgcaggacgccccgggt
gtggcccctctgcagatcggtggtaccgatttgcctaatggacctctagctccaagttcg
aattcagatgtgcctcagcaacgcccgagtgtagttgtctcaccacactctacagaccct
gttatacaggggcaccagatcacagccgttccccacccagggtcaagagggccccattcg
cctgccctggccccggacctccgggctgcaaacggcacagcggacagtaaaactgtgaag
agacccgcggaggataatgagcgggagacagtcccgggagttccaaataaagtgggggtt
cgaatcgttacaatcagtgaccccaacaacgccggctgcagtgcgaccatggttgcggtc
ccagccggggcggatcccagcacggtggctaaagcagccatagaaagcgctgcacagcac
aagccgcagccgccagcctacgtgcagagcgtggccgcacagaacactcctgtggcgcct
cccgcagctgtgcaggtgcagagccagcctcatggctctcagcctcctccgttcagcgcg
tctagtccacacagggatccggtgcgaaaacctgggcacaacttcatgtgtctctggcag
tcttgtaaaaagtggtttcagacaccgtcgcaagtgttcttccacgcggccactgaacac
ggggggaaggacgcgtacccggggcagtgcctttgggagggctgcgagcccttccagcgg
cagcggttctccttcatcacccacttgcaggataagcactgttccaaggatgccctgctt
gctggactgaaacaagacgaaccgggacaggcaggaagccagaaaccttctaccaagcag
ccagctgcggtgggcgcgggcccgactcccagagcacagaaggccatcgtcaaccacccc
agcgccgccctcatggcgctgaggagggggtcgcggaacctcgtcttccgggatttcaca
gatgaaaaagagggaccaataacgaaacacatccgtctaacagctgccttaatactgaaa
aacattggtaaatattcagaatgtggtcgcagattgttaaagagacatgaaaacagcttg
tccgcgctagccatcagcaacatggaagcttcctccacccttgccaaatgcctttatgaa
cttaattttacagttcagagtaaagagcaggacaaagactcagaaatgctgcaatga
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integrated database retrieval system
