Manis javanica (Malayan pangolin): 108409415
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Entry
108409415 CDS
T06054
Symbol
SCAF8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mjv03021
]
108409415 (SCAF8)
03041 Spliceosome [BR:
mjv03041
]
108409415 (SCAF8)
Transcription machinery [BR:
mjv03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108409415 (SCAF8)
Spliceosome [BR:
mjv03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108409415 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
108409415
NCBI-ProteinID:
XP_036879347
LinkDB
All DBs
Position
Unknown
AA seq
1288 aa
AA seq
DB search
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITSTDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLTPLEQGVSFNKKLMDRFDFGEDSEHNEET
KKEITTSQLSHVSDSVNNSIFHQIAEQLQQQNLEHLRQQLLEQQPQKATPQDSQEGTFGS
EHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRS
RTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQ
KKGLPPVRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMV
HRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDD
LEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVAM
LQIPVAPAVPTVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPPP
VVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGSLVLPGGSVASSLAASTLPAGNVFNPP
AKQAEPEEKVPHLIEHQISGENTRSVIPNDISSTAILGGQPPNVTSNSGILGVPRPNVSS
NSEILGVRPSNVSSSSGIIGAQPPNILNNSGILGIQPPSVSSSSGLLGVLPPNIPNNSGL
IGVQPPSIPNTSGLLGTQPPAGPQNLPPLNLSSQRMPPIPMLDIRPGLIPQTPGPRFPLI
QPGIPPQRGIPPPSVLDAALHPPPRGPFPPGDIFCQPERPFLVPGRQSVDNVTNPEKRIP
LGNDSIQQEGDRDYRFPPIETRESIGRPPPVDVRDVVGRPVDPREGPGRPPLDGRDHFGR
PPIDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEERGRF
RSGNYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRM
QNTWVAPPHARVFDFFEGTTSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKLTSS
SETNKEKSDTVADVESEPVVKSTETEGT
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtgaaaaccttcaacagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaatgactacaaacca
cctatttctaaagcaaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagtgttgagaaattcattcagaaatgtaaaccagaatataag
gtacctggactttatgttatcgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtatttgcacccagatttagtaataacatcattagcacttttcagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattgaatttatggcagaag
aataatgtatttaagagtgagattattcaacctcttttggatatggcagcaggaattccc
cctccagtcgttacacctgttctggccagtactaccgctgccatgagcaataccccagga
actcctgtgacgcctgttactccagccaatgtggtacagggtttacccgatccatgggta
tctcagataacaagtacagatacacttgcagctgtagctcagatcttacaaagtcctcaa
ggccagcagcttcagcagttaatacagacgttgcagatacagcagcagaagcctcagcct
tccatcctgcaggccctggatgctggtcttgttgtgcagctgcaggctctcacggcacag
ctcacagctgctgcagccgctgccaacaccctcactcccttagaacagggagtgtccttt
aacaagaagttgatggatagatttgactttggggaagattctgagcataatgaagaaacc
aaaaaggaaatcacaacttctcaactttctcatgtttcagactctgtgaacaattccatt
tttcatcagatagcagaacagctacagcagcagaaccttgaacatcttagacaacaactc
ctggaacaacagcctcaaaaggcaacccctcaggacagccaagaaggaacatttggatca
gagcattctgcatccccatcacaagggagcagtcaacagcatttccttgaacctgaagca
aatttggatgattccatagatattcagcaacaggatatggatatagatgaaggacaagat
ggagtagaagaggagatctttgaacaagaagcaaagaaagtggctgttcgctcaagatca
agaacacattcacgatctcgttcaagatcaccaagaaaacgaaggtctaggtcacgatct
ggttctcgaaagcgtaaacacagaaaacgatcacgctcacgctcaagagaaagaaagagg
aagtcatcacgttcatactcaagtgaaagaagagctagagaaagggagaaagaacggcag
aaaaagggattacctccagttagatctaaaacattaagtgtgtgtagtactactctgtgg
gttggtcaggtagacaagaaggccacacagcaagatttaaccaacctgtttgaagagttt
ggacaaattgaatccattaatatgattcctcccaggggctgtgcttatgtctgcatggtt
catcgacaagatgcctttcgtgctcttcagaaacttagttctggatcatataaaattggg
tccaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaacaa
ttctgggatgtggatcttggagttacatatataccttgggaaaaagttaaagtagatgac
ttggaaggttttgcagaaggaggcatgattgatcaggaaactgtaaatactgagtgggaa
actgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaactcca
gttgaaaaggagacagtggtcacaacccaggcagaggttttccctccacctgttgctatg
ttacagattccagtagcaccagctgtgcctacagttagtttagtaccaccagcatttcct
gtgtcaatgccggttcctcctcctggattcagtccaatccctccacctccttttctgaga
gcaagttttaacccatcacagccacctcctggtttcatgccacctccagttccacctcct
gttgtaccaccacctactattccaccagtagtaccaacatctttagtgcagccaccatta
tccatgactccagaaaccgtgaaggacgttggatttggtagtctcgttttaccgggtggt
tctgttgccagcagtcttgctgcttccaccctgccagctggaaatgtttttaatcctcca
gctaaacaagcagagcctgaagaaaaagtacctcatcttatagaacaccagatttctggt
gaaaacaccagatcagtgattccaaatgacatttcaagtactgcaattttaggaggacaa
ccgccaaatgtgacaagcaattctggaattctgggtgtcccaagaccaaatgtatcaagt
aattctgaaattcttggagtccggccttctaatgtttccagtagttctggaattattgga
gcccagccaccaaatattctaaataactctggtattttgggaatacagccaccaagtgtt
tcgagtagttctggacttctgggagtgctacccccaaatatccctaacaattctggactt
attggagtacagccaccaagtattccaaatacttctggacttttgggaacacagccacca
gctgggcctcaaaacttaccccctttaaatctctctagtcagaggatgcctccaatccca
atgctggatattcgtccaggactgataccacagacacctggaccaagattccctttaata
cagcctggaattccaccccaacggggaatccctcccccatcagtacttgatgcagctctt
catccaccacctcgtggtccttttcctccaggagatattttttgtcaaccagaaagacct
tttctagttcctggaagacaaagtgtagacaatgttactaatccagaaaaaaggataccg
cttgggaatgatagcattcaacaggaaggagatagagattaccggtttcctcccatagaa
accagggaaagcattggtagacctcccccagtggatgtcagggatgtggttggacgacct
gtagatccaagagaaggtcctggaaggcctccgttagatggtagggatcattttggaaga
ccacctatagatattagagagaatcttgtgaggccaggtatagatcatcttggtcggaga
gaccactttggctttaatccagagaagccctggggacatagagattttgatgagagagag
catcgggttctacctgtttatggtggtccaaaaggcttacatgaagaaagaggtagattc
cggtctggaaactatcgatttgatcctagaagtggtccttggaacagaggatttggacaa
gaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagggacagggat
gacagagattttgatttctgcagagaaatgaatggaaatcgtcttggacgagatagaatg
caaaacacctgggtcgccccccctcatgctcgggtttttgatttttttgaagggaccact
tctcagcgaaaaggtgataatgtgcctcaggttaatggtgaaaatactgagagacatgct
cagccaccacccttaccagtacagaatgatcctgaactttatgaaaaactgacatcttca
agtgaaacaaacaaggagaagagtgacacagttgctgatgtagaaagtgaaccagtggta
aaaagcacagaaactgaggggacataa
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