Manis javanica (Malayan pangolin): 108409431
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Entry
108409431 CDS
T06054
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1 isoform X1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv02010
ABC transporters
mjv04148
Efferocytosis
mjv04975
Fat digestion and absorption
mjv04979
Cholesterol metabolism
mjv05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
108409431 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108409431 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
108409431 (ABCA1)
04979 Cholesterol metabolism
108409431 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
108409431 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mjv02000
]
108409431 (ABCA1)
Transporters [BR:
mjv02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
108409431 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DUF4162
AAA_23
GCIP_N
Mst1_SARAH
Motif
Other DBs
NCBI-GeneID:
108409431
NCBI-ProteinID:
XP_017535498
LinkDB
All DBs
Position
Unknown
AA seq
2263 aa
AA seq
DB search
MAYWPQLRLLLWKNITFRRRQTFQLLLEVAWPLFIFLILISVRLNYPPYEQHECHFPNKA
MPSAGTLPWIQGIICNANNPCFRYPTPGEAPGVIGNFNKSIVSRLFSDAQRLLLYSQKDT
SIKDIHKVLRTLRQIESSSSSLKLQDFLGDNETFSGFLNHNLSLPRPTVDNILEANVSLH
KIFLQGYQLHLTNLCSASKLEETIQLSDQEVFKLCSLPREKLDAAEQVLRSNMDILKPIM
TELNSTSAFLSKELSEATRTLLDSLGSLTQELFSMRSWSDMRQEVIFLTNVNSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNTTEEDADTFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDLEGMWEELS
PKIWTFMESSSEMDLVRILLDSRSNDHFWEQQLDGLGWTAKDIVAFLAKHPEDVWSTNGS
VYTWREAFNETSQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGIVFTG
ITPGSVELPSHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDLRYVWGGFTYLQDVV
EQAIIRVLTGIEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLMSAGLLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFTLYLPYVLCVAWQDHVGFTLKVFAS
LLSPVAFGFGCEYFALFEEQGIGVQWDNLFESPVEEDGFNLTTSVSMMLFDAFIYGVMTW
YIEAVFPGQYGIPRPWCFPCTRSYWFGEESDEKSHPGSSQKGISEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSTIRQNLGVCPQHNVLFDMLTVEEHIWFYARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGRLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKVVPGLPRAGQSGGRGGEVQRLVALTQDVSAISNLIRKHVAEARLVE
DIGHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVD
AETSDGTLPARRNRRAFGDKQSCLRPFTEDDAIDPNDSDIDPESRETDLLSGMDGKGSYQ
VKGWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLE
LQPWMYNEQYTFVSNDAPEDVGTQELLNALTKDPGFGTRCMEGNPIPDMPCSVGEEDWTT
APVPQTITDLFQNGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQKTVDILQ
NLTGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSQSLPPSQEVNDAIREM
KKLLKVAKDSSADRFLSSLGRFMTGLDKKNNVKVWFNNKGWHAISSFLNVINNAILRANL
QKGENPRQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQ
ERVSKAKHLQLISGVKPVIYWLSNFVWDMCNYVVPATLVVIIFICFQQKSYVSSTNLPVL
ALLLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNN
INDILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAV
EGLVFFLVTVLIQYRFFIRPRPVNTKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELT
KIYRSKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDALLNKNSIL
SNIHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLMKYG
EKYAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVV
LTSHSMEECEALCTRMAIMVNGKFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEF
FGLAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFV
NFAKDQSDDDHLKDLSLHRNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6792 nt
NT seq
+upstream
nt +downstream
nt
atggcttattggcctcagttgaggttgctgttatggaagaacattactttcagaagaaga
caaacatttcagctgttgctggaggtggcctggccattatttatcttcctgatcttgatc
tcagttcggctgaactacccaccctatgaacaacatgaatgccatttcccaaacaaagcc
atgccctctgcaggaacacttccttggattcaggggattatctgtaatgccaataacccc
tgtttccgttatccaactcctggtgaggctcctggggttattggaaactttaacaaatcc
attgtgtctcgcctgttctcagatgctcagcggcttcttttatatagccagaaagacacc
agcataaaagacatacacaaagttctgagaacactgcggcagattgaaagttccagctca
agcttgaaacttcaggatttcttgggggacaatgaaaccttctctggattcctgaatcac
aacctctctctgccaaggcctactgtggacaatatcctggaggctaatgtcagtctccac
aagatatttttacaaggctaccagttacatttgaccaatctgtgtagtgcatcaaaacta
gaagagacgattcagcttagtgaccaagaagttttcaagctttgcagcttgccaagggag
aaattggatgcagcagagcaagtacttcgttccaacatggacatcctgaagcccatcatg
acagaactaaactctacatctgccttcctgagtaaggaattgtctgaagccacaagaact
ttgctggatagtctggggtcactgacccaagagctgttcagcatgaggagctggagtgac
atgcggcaggaggtgatctttctgaccaacgtgaacagctctagctcctccacccagata
taccaggctgtgtcccgcattgtctgtggccaccccgagggtgggggcctgaagatcaaa
tctctcaactggtatgaggacaacaactacaaagccctctttggaggcaacaccactgaa
gaagatgctgacacattctatgacaattccacaactccatactgcaacgatttgatgaaa
aatttggagtccagtcctctttcccgcatcatatggaaagctctcaagcctctgcttgtt
gggaagatactgtatacacctgacactcctgccacaagacaggtgatggctgaggtgaat
aagaccttccaggaactggctgtgtttcatgatctggaagggatgtgggaagagctcagc
cccaagatctggaccttcatggagagcagctcagaaatggaccttgttcggatactgttg
gacagccgcagcaatgaccacttttgggaacagcaattggatggcttaggttggacagcc
aaagatattgtggcatttctggccaagcatccagaggatgtctggtctacaaatggctct
gtgtatacctggagagaagccttcaatgagaccagccaggcaatccagaccatatctcgc
ttcatggagtgtgtcaacctgaacaagcttgaaccggtagcaacagaagttcggctcatc
aacaagtccatggagctgctggatgagagaaagttctgggctggtatagtgttcactgga
attactcctggcagtgttgagctgccctctcatgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaatcaaggatgggtactgggacccaggtcctcgggct
gacccctttgaggatttgcgttatgtctgggggggcttcacctacttgcaggatgtagtg
gagcaggccatcatcagggtgctgacgggcatcgagaagaaaactggtgtctatgtgcaa
cagatgccctacccctgttatgtcgatgacatcttcctgcgggtgatgagccgatcaatg
cctcttttcatgacgttggcctggatttactctgtggctgtgatcatcaagggcatcgtg
tatgagaaggaggcaaggctgaaggagaccatgcgcatcatgggcctggacaatggcatc
ctctggtttagctggttcatcagtagcctcatccccctgctgatgagcgccggcctgctt
gtggtcatcctgaaattaggaaacctgctgccctacagtgaccccagcgtggtgtttgtc
tttctgtcggtgttcgctgtggtgaccatcctacagtgctttctgatcagcaccctcttc
tccagagccaacctggcggcagcctgtgggggcatcatctacttcacactgtacctgccc
tatgtcctgtgcgtggcttggcaagatcatgtgggcttcacactgaaggtctttgctagc
ctgctgtctcctgtggcttttgggtttggctgtgaatactttgccctttttgaggagcag
ggcattggggtacagtgggacaacctctttgaaagccctgtggaggaagatggcttcaac
ctcaccacctccgtctctatgatgctgtttgatgccttcatctatggggtgatgacgtgg
tacatcgaggctgtgtttccaggccagtatggaattcccagaccctggtgtttcccttgc
accaggtcctattggtttggggaggaaagtgatgagaagagtcaccctggttccagccag
aagggaatatcagaaatctgcatggaggaggagcccacacacctgaagctgggtgtgtct
attcagaacctgatgaaggtttaccgagatggcatgaaggtggcagtcgatggcctggct
ctgaacttctatgaaggccagatcacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaattctgactggcttgtttcctcccacctcgggcactgcctacattctg
gggaaagacattcgctctgagatgagcaccatccggcagaacctgggagtctgtccccag
cataatgtgctgtttgacatgctgactgttgaagaacacatctggttctatgcccgccta
aaagggctctcagagaagcatgtaaaagcagagatggagcagatggccctggatgttggt
ttgccacccagcaaactgaaaagcaaaacaagtcagctgtctggtggaatgaagagaaag
ctgtctgtggccttggcctttgttgggggatccaaggttgtcattctggatgagcctaca
gctggcgtggacccttactcccgcaggggaatatgggagctgctactgaaataccgacaa
ggccgcaccattattctctccacacaccacatggatgaagcggacatcctgggggacagg
attgccatcatttcccatgggaggctgtgctgtgtgggctcctccctgtttttgaagaac
cagctgggaacaggctactacctgactctggtgaagaaggatgtagaatcctccctcagt
tcctgcagaaatagcagtagcactgtgtcgtatctgaaaaaggtggtgcctgggcttccc
cgagctgggcagagtggaggcagaggaggagaggtgcagaggctggtggcgctgactcaa
gatgtctctgccatctctaacctcatcaggaagcatgtggctgaggcccggctggtagaa
gacattggacatgagctgacctatgtgttgccctatgaagctgccaaagagggagccttt
gtggagctcttccatgagattgatgaccggctgtctgacctgggtatctctagttatggc
atctctgagactaccctggaagaaatatttctcaaagttgctgaagagagtggagtagat
gctgagacctcagatggcactttgccagccagacgaaacagacgggcctttggggacaag
cagagctgtcttcgcccattcactgaagatgatgccattgatccgaatgattccgacata
gacccagaatccagagaaacagacctgctcagtgggatggatggcaaaggttcctaccaa
gtgaagggctggaagctcacacagcaacagtttgtggcccttttgtggaagaggctgctg
attgccaggcggagtcggaagggattctttgctcagattgtcctgccagccgtgtttgtc
tgcattgcattggtattcagcttgattgtgccacccttcggcaagtaccccagcctggaa
cttcagccctggatgtacaatgaacagtacacatttgtcagtaatgacgctcctgaggat
gtgggcacccaggaacttttgaatgccctcactaaagaccctggcttcgggacccgatgt
atggaaggaaacccaattccagacatgccctgctcagtgggggaggaggactggaccact
gccccagttccacagaccatcacggacctgttccaaaatgggaactggacaatggagaac
ccctcacctacctgccagtgcagcagtgacaaaatcaagaagatgctgcccgtgtgtcca
ctgggggcagggggtctgcctcctccacaaagaaaacagaaaactgtggacatccttcag
aacctgacaggaagaaacatttcagattatctggtgaagacttatgtgcagatcatagcc
aaaagcttaaagaacaagatctgggtgaatgagtttaggtatggaggattttccctgggt
gccagtaattctcagtcacttcctccaagtcaagaagttaatgatgccatcagggaaatg
aagaaactcttgaaggtggccaaggacagttctgcagatcgatttctcagcagcttggga
aggttcatgacaggactggataagaaaaataacgtcaaggtgtggttcaataacaagggt
tggcatgccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacttg
cagaagggagagaatcctagacaatatgggatcactgcttttaatcaccccctgaatctc
accaaacagcagctttcagaagtggctctgatgaccacatcagtggatgtccttgtgtcc
atctgcgtcatctttgcaatgtccttcgtcccagccagctttgttgtgttcctgatccag
gagcgggtcagcaaagcgaagcacctgcagctcatcagcggagtgaagcccgtcatctac
tggctctccaattttgtctgggacatgtgcaactatgtggtccctgccacactggtcgtt
atcatcttcatctgctttcagcagaagtcctacgtgtcctccaccaatctgcctgtgcta
gcccttctacttttgctatatgggtggtcgatcacacctcttatgtacccagcctccttt
gtgttcaagattcccagcacagcttacgtggtcctcaccagtgtgaacctcttcatcggg
atcaatggcagcgtggccacttttgtgttggagctcttcaccaacaataagctgaataat
atcaatgatatcctgaagtctgtgttcttgatcttcccacatttttgcctgggacggggg
ctcattgacatggtgaaaaaccaggccatggctgatgccttggaaaggtttggggagaat
cgctttgtctcaccactctcttgggacttggtaggacggaacctcttcgccatggccgtg
gaagggctggtgttctttctcgtcactgttctgatccagtacagattcttcatcaggccc
agacctgtaaacacaaagcttcctcctctgaatgatgaggatgaagatgtgaggagggaa
agacagagaattcttgatggtggagggcagaacgacatcttggaaattaaggagttgact
aagatatacagaagtaagaggaagcctgctgttgacaggatttgtgttggtattcctcct
ggtgagtgctttggacttctgggagtcaatggggctgggaaatcatcaactttcaagatg
ttaactggagatactactgttaccagaggagatgctttgcttaacaaaaatagtatctta
tcaaacatccatgaagtacatcagaacatgggctactgtcctcagtttgatgctatcacg
gagctactgactggaagagaacatgtagagttctttgccctcttgagaggagtcccagag
aaagaagttggcaaggttggtgagtgggcaattcggaaactgggcctcatgaagtatgga
gaaaaatatgctggtaactatagtggtggcaacaagcgcaagctttctacagccatggct
ttgattggcggacctcctgtggtgtttctggatgaaccaaccacaggcatggatcccaaa
gcccggcgattcttgtggaattgtgccctaagtattgtcaaggaagggagatcagtagta
cttacgtctcatagtatggaagaatgtgaagctctctgcactaggatggcaattatggtt
aatgggaagttcaggtgtcttggcagtgtccaacatttgaaaaataggtttggagatggt
tatacaatagttgtacgaatagcagggtccaaccctgatttaaagcctgtccaggaattc
tttggacttgcctttccaggaagtgtcctaaaagagaagcaccggaacatgctgcaatac
cagcttccatcctcattatcttctctagccaggatcttcagcatcctttcccagagcaaa
aagcgactccatatagaagactactctgtttctcagacaacccttgaccaagtatttgta
aactttgccaaggaccaaagtgatgatgaccacttgaaggacctgtcattacacagaaac
cagaccgtagtggatgttgcggttctcacatcttttctgcaggatgagaaagtgaaagaa
agttatgtatga
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integrated database retrieval system
