Manis javanica (Malayan pangolin): 108409545
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Entry
108409545 CDS
T06054
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03013
Nucleocytoplasmic transport
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108409545
09122 Translation
03013 Nucleocytoplasmic transport
108409545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
108409545
03041 Spliceosome [BR:
mjv03041
]
108409545
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108409545
Spliceosome [BR:
mjv03041
]
Complex C
Other components
EJC/TREX
108409545
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108409545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
108409545
NCBI-ProteinID:
XP_073067839
LinkDB
All DBs
Position
1:23994683..24099932
Genome browser
AA seq
1600 aa
AA seq
DB search
MTDDVTEEEFGGSRGFLAGSGEGFNPSGSNLHLCRVLSENKSHDCSSYRDFQQALYELSC
HVVNGNLKHEHASNVLNDISEFHEDMPSILADVFCILDTETNCLEEKSKSDYFTQLVLAC
LYLVSDTVLKERLDPETLESLGLTEQSQQFNQKSVKIKTKLFCKQQKFNLLREENEGYAK
LIAELGQDLSGNITSDLIVENIKSLIGCFNLDPSRVLDVILEVFECRPEHDEFFISLLES
YMSMCEPQTLCHILGSKFKFYQELNGETPSSLYRAAAVLLQFNIIDLDDLYVHLLPADNC
IMAEHKREIVEAKQIVRKLTMVVLSSKKMDERDKEKEKEEEKVEKPPDNQKLGLLEALLK
IGDWPHAQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQT
KRAPKQAESFEDLRRDVFSMFCYLGPHLSHDPILFTKVVRIGKSFMKEFQSDGGKQEDKE
KTEVILSCLLSIADQVLLPSLLLMDCNACISEELWGLFKTFPYQHRYHLYGQWKNETYNG
HPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLI
TPVVDSLKYLTSLNYDVLAYCIIEALANPEKEKMKHDDATISSWLHSLASFCGAVFHKYP
IDLVGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEALTGGEQLKAEGG
YFGQIRNTKKSSQRLKDALLDHDLALPLYLLMAQQRNGVNFQEGGEKHLKLVGKLYDQCH
DALMQFGGFLASNLSTEDYIKXVPSIDVLCNEFHTPYDAVFCLSRPMYAQHISSKYDELK
KSEKGSKQQHKVLKYITSCEMVMAPVHEAVVSLHVSEAWDDISPQFYATFWSLTMYDLAV
PHTSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQ
RLKLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKIPNFSTL
LCYDRVFSDIIYTVXSYTENETCRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTIL
RATGFDGGNKADQLDYENFCHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWY
PKVLNLGQVLERRVYKICQEEKEKRPDLYAMAMGYSGQLKSRKSYMIPENEFHHKDPSPR
NAVASVQNGPGGGPSPSSTGSASKSDESSNDETDKSRERSQCGVKAVNKASSATPKGNSS
NGNICFNSSKAVKENGKEKGKEKEKEKKEKTPAMTPEVRVLGKDGKEKPKEKRPNKDEKA
REMKERTPKSDKEKEKFKKEEKAKDEKFKTTGPNVESKSTQEKEREEPSRERDIVKEMKS
MENAKGGEKASVSGSLKSPVPRSVIAEPEREQKCCKIDKHHSPSYSSTVKDSFIELKKSS
AKLYINHAPPLSKSKEKEMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDREVLPPD
LTKRRKGENGTMGIPKRRCKSPCESPYPNEKDKGKNXSKSSGKEKSSDSFKSEKMDKISF
GKKESRHDKEKIERKEKWDSSRGREEKKQYPFHLIDVFNQ
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atgacggatgatgtcactgaggaggagtttggaggcagtagaggctttcttgctggtagt
ggggaaggcttcaacccatccggatccaatttgcatttatgccgtgtcctgagtgaaaat
aaaagccatgattgttcatcctatagagatttccagcaagctctttatgagttatcatgc
catgtcgttaatggaaatctcaagcatgaacatgcatctaatgttcttaacgacattagt
gaatttcatgaggatatgccttccattcttgctgatgtattctgcatattagatactgag
acaaattgtttagaagaaaaaagcaagagtgactattttacacaattggtattagcatgt
ttgtatttagtttcagacacagttctaaaggaacgcctggatccagaaaccttggaatca
ttagggcttaccgaacaatcacagcagttcaatcaaaagtcagttaaaatcaagacaaaa
ctcttttgtaagcagcaaaaattcaatttgttaagagaagagaatgaaggttatgcgaag
ctgattgctgaattggggcaagatttatctggcaatattactagtgacttaatcgtagaa
aatatcaaatctttaataggatgctttaatctggatcccagtagagttttggatgtcatt
ttagaagtgtttgaatgcaggccagaacatgatgaattctttatatctttattagaatct
tatatgagtatgtgtgaaccgcaaacactgtgtcatattcttggatccaagttcaagttt
tatcaggaactaaatggagagaccccttcatctttatacagagctgcagcagtacttcta
caatttaatattattgatttagatgatctttatgtacatcttcttccagctgacaattgc
attatggctgaacacaaacgagaaattgtggaagctaagcaaattgttagaaaacttaca
atggttgtattgtcttccaaaaaaatggatgagcgagacaaagaaaaggaaaaagaagag
gagaaagtagagaagccacctgacaaccaaaaacttggtttgttggaagccttgttaaag
attggtgattggccgcatgcccagaacattatggatcagatgcctccatactatgcagct
tcacataagctaatagcccttgctatttgcaagcttattcacataactattgagccgctc
taccgaagagttggcgttcctaaaggtgctaaaggctcacctgttaatgctttgcaaact
aagagagcaccaaaacaagcagagagctttgaagacttgaggagagatgtcttcagtatg
ttctgttaccttggtcctcatctttctcatgatcccattttattcacgaaagtggtgcgc
attggcaaatcatttatgaaggagtttcagtctgatggaggcaaacaagaagataaagag
aaaacggaagttatccttagctgtttgcttagcattgctgaccaggtactacttccatct
cttttgttgatggactgcaatgcttgtatttctgaggaactgtggggattgtttaaaaca
tttccatatcagcatagatatcatctgtatggccaatggaagaatgaaacttataacggt
cacccacttttagtaaaagttaaagctcaaacaatagacagagccaaatatatcatgaag
cgtctaaccaaggaaaatgtgaagccttctggaagacaaattggaaagttgagccacagc
aatccaaccattttgtttgattatatcttgtcacaaatacaaaagtatgataacttaata
acacctgtagtagattcattgaaatatctcacttcgttgaattatgatgtcttggcctat
tgtatcattgaagctctagctaatccagaaaaggagaaaatgaaacacgatgatgcaacc
atctcaagctggcttcatagtctggctagtttctgtggtgcggtttttcataaataccca
attgatcttgttggtcttcttcaatatgtggctaatcagctaaaggcgggcaaaagtttt
gacctgcttatattgaaagaagtggtacagaaaatggcaggaatagaaattacagaggaa
atgacaatggagcaactagaggccttgactggtggagagcagctaaaagctgagggtggc
tattttggccagatcagaaacactaaaaaatcctcccagagactgaaggatgcactattg
gaccacgaccttgctcttcctctgtatttgcttatggctcagcagagaaatggggtcaac
tttcaggaaggtggagagaaacatctgaaacttgtgggaaagctctatgatcagtgtcat
gatgccctgatgcaatttggtgggtttttagcatctaatctaagcacagaagattacata
aagtgagtgccttcaattgatgtgctctgtaatgaatttcatacaccctacgatgcagta
ttttgcctgtctaggccaatgtatgcacagcacatttcgtcaaagtatgatgaacttaaa
aaatcagaaaagggaagtaaacagcagcataaagttcttaagtacattacatcatgtgaa
atggtgatggctcctgtccatgaagcagtggtctccttacatgtttccgaggcctgggat
gacatcagccctcaattttatgccacattctggtcattgacgatgtacgaccttgcagtt
ccacataccagctacgaacgggaagtcaataaacttaaagtccagatgaaagccattgat
gacaatcaggaaatgcctccaaataaaaagaaaaaagaaaaggagcgctgtactgccctt
caggacaagcttcttgaagaagaaaaaaaacagatggaacatgtacagcgagttctacag
agactgaaactggaaaaggacaactggcttttagcaaaatctaccaaaaatgagaccatc
acaaaatttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtt
tactgtgctcgttttgttgaactggtgcatcaacagaaaattccaaatttttccacactt
ctttgctatgatcgtgttttctctgacataatttacacaggaagctatactgaaaatgaa
acttgtcgatatgggagatttctttgctgcatgttagaaactgtgaccaggtggcacagt
gacagagccacatatgaaaaggaatgtggaaattatccaggattcctcactatattacgg
gcaactggatttgatggaggaaataaagctgatcaattagactatgaaaatttttgtcat
gttgtacataaatggcattacaaattaaccaaggcatcggtgcattgccttgaaacaggt
gagtatactcacatcaggaatatcttgattgtgctaacaaaaatacttccttggtaccca
aaagtattgaatctgggtcaggttttggaaagaagagtatataaaatctgccaagaagaa
aaagagaagaggccagatctatatgcaatggctatgggctactcggggcagttgaaaagt
agaaagtcatacatgatacctgaaaatgagtttcatcacaaagacccctctccgaggaat
gcagttgccagtgtacaaaatgggcctggtggtgggccttctccatcatcgacaggaagt
gcatctaaatctgatgaaagcagtaatgatgagactgataaatcaagggagagatctcag
tgcggtgtgaaagctgttaataaagcttctagtgctacaccaaaaggaaattcaagcaat
ggaaatatttgctttaacagcagcaaagctgttaaagaaaatggcaaggagaaagggaaa
gagaaagaaaaagagaaaaaagaaaagactccagctatgactccagaagtcagggtactt
ggtaaagatggtaaagaaaaaccaaaggaaaaacggccaaataaagatgaaaaagcaaga
gaaatgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaagaagaa
aaagctaaagatgagaaattcaagaccaccggccccaatgtagaatcaaaatctactcaa
gaaaaggaaagagaggagccatccagagaaagagatatagtaaaggaaatgaaatcaatg
gaaaatgctaaaggaggagaaaaagcatcagtttctgggtccttaaagtcacctgttccc
cgatcagttattgcagagcctgaaagggaacaaaaatgctgcaaaattgataaacaccat
tctccatcatattcctcgacagtaaaggacagtttcatcgaactcaagaagtcttcagca
aagctctacattaatcatgctccaccactgtccaagagtaaggagaaagaaatggacaag
aaagacttggacaagtcaagggaaagatccagagaaagagagaaaaaggatgaaaaggac
aggaaagagcggaaaagggatcattcaaacaatgaccgtgaagtactaccaccagactta
accaagagacgaaaaggggaaaatggaacaatggggattccaaagcgcagatgtaaaagt
ccatgtgagtctccttatccaaatgagaaagacaagggaaaaaagtcaaaatcttcaggc
aaagaaaaaagcagcgattcatttaaatctgaaaagatggataaaatctcctttggcaaa
aaggagtctaggcatgataaagaaaagatagaaaggaaagagaaatgggacagttcaaga
ggaagggaagagaagaaacaatatccttttcatcttattgatgtttttaatcagtag
DBGET
integrated database retrieval system
