Manis javanica (Malayan pangolin): 108409883
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Entry
108409883 CDS
T06054
Symbol
SMO
Name
(RefSeq) smoothened homolog isoform X1
KO
K06226
smoothened
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv04340
Hedgehog signaling pathway
mjv04360
Axon guidance
mjv05200
Pathways in cancer
mjv05205
Proteoglycans in cancer
mjv05217
Basal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
108409883 (SMO)
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
108409883 (SMO)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
108409883 (SMO)
05205 Proteoglycans in cancer
108409883 (SMO)
09162 Cancer: specific types
05217 Basal cell carcinoma
108409883 (SMO)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
mjv04030
]
108409883 (SMO)
G protein-coupled receptors [BR:
mjv04030
]
Frizzled / Smoothened family
108409883 (SMO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frizzled
Fz
Dicty_CAR
DUF7470
Motif
Other DBs
NCBI-GeneID:
108409883
NCBI-ProteinID:
XP_017536141
LinkDB
All DBs
Position
Unknown
AA seq
788 aa
AA seq
DB search
MAASRLAWELALLLLGLLLVLGGPGRGSALSGNVTGPGPRSAGGSARRSAAGTGPPPPLL
SHCGRAAPCEPLRYNVCLGSALPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAV
IQPLLCAVYMPKCENDRVELPSRTLCQATRGPCAIVERERGWPDFLRCTPDHFPEGCPNE
VQNIKFNSSGQCEAPLVRTDNPKSWYEDVEGCGIQCQNPLFTEAEHQDMHSYIAAFGAVT
GLCTLFTLATFVADWRNSNRYPAVILFYVNACFFVGSIGWLAQFMDGARLEIVCRADGTM
RLGEPTSNETLSCVIIFVIVYYALMAGVVWFVVLTYAWHTSFKALGTTYQPLSGKTSYFH
LLTWSLPFVLTVAILAVAQVDGDSVSGICFVGYKNYRYRAGFVLAPIGLVLVVGGYFLIR
GVMTLFSIKSNHPGLLSEKAASKINETMLRLGIFGFLAFGFVLITFSCHFYDFFNQAEWE
RSFRDYVLCQANVTIGLPTKKPLPDCEIKNRPSLLVEKINLFAMFGTGIAMSTWVWTKAT
LLIWRRTWCRLTGQSDDEPKRIKKSKMIAKAFSKRRELLQNPGQELSFSMHTVSHDGPVA
GLAFDLNEPSADVSSAWAQHVTKMVARRGAILPQDVSVTPVATPVPPEEKANVWLVEAEI
SPELDKRLGRKKKRRKRKKEVCPLVPPAVLHLPAPAPASSAVPRLPQLPRQKCLVAASAW
GAGESCRQRAWTLVSNPFCPEPSSLQDLFLPSAPDPTAWAQGCRQGLGPIHSRTNLMEAE
LMDADSDF
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atggccgcttcccgccttgcatgggagctggcgctcctgctcctggggctgctgctggtg
ctggggggcccgggccgggggtcggccttgagcgggaacgtgaccgggcctgggccgcga
agcgcaggagggagcgccagaaggagcgcggcggggaccggccctccgccgccgctgctg
agccactgcggccgggccgccccctgcgagccgctgcgctacaacgtgtgcctgggctcg
gcgctgccctacggggccacctccacgctgctggccggggactcggactcccaggaggaa
gcgcacggcaagctcgtgctctggtcgggcctccggaacgccccccgctgctgggcagtg
atccagcccctgctgtgtgccgtgtacatgcccaagtgtgagaatgaccgggttgagctg
cccagccgcaccctttgccaggcaacccgcggcccctgtgccatcgtggagagggagcgc
ggctggcccgacttcctgcgctgcacccctgaccacttccctgagggctgcccaaatgag
gtgcagaacatcaaattcaacagttcgggccagtgtgaggctcccttggttcggacggac
aaccccaagagctggtacgaggacgtggagggctgtggcatccagtgccagaacccgctc
ttcactgaggcggagcaccaggacatgcacagctacatcgcggctttcggggctgtcacg
ggcctctgcacgctcttcactctggccacgtttgtggctgactggcggaattcgaatcgc
taccctgctgttattctcttctatgtcaacgcgtgtttctttgtgggcagcattggctgg
ctggcccagttcatggacggtgcccgcctggagattgtctgccgtgcagatggcaccatg
aggcttggggagcccacctccaacgagaccctgtcctgtgtcatcatctttgtcatcgtg
tactatgccctgatggctggtgtcgtctggtttgtggtcctcacctatgcctggcacacc
tccttcaaagccttgggtaccacctatcagcctctgtctggcaagacatcctactttcac
ctgctcacttggtctctcccctttgtcctcactgtggcaatccttgctgtggcccaggtg
gatggggactccgtgagtggcatctgttttgtgggctacaagaactaccgataccgcgct
ggctttgtgctggccccaattggcctggtgcttgtggtgggaggttacttcctcatccga
ggagtcatgactctgttctccatcaagagcaaccaccctgggctgctgagtgagaaggct
gccagcaagatcaatgagaccatgctgcgccttggcatttttggcttcctggcctttggc
tttgtgctcatcaccttcagctgccacttctacgacttcttcaaccaggctgagtgggag
cgcagctttcgggactatgtgctgtgccaggccaatgtgaccatcgggctgcccaccaag
aagcccctccctgactgtgagatcaagaatcgccctagcctcctggtggagaagatcaac
ctgtttgccatgtttggaaccggcattgccatgagcacctgggtctggactaaggccaca
ctactcatctggaggcgtacctggtgcaggttaacagggcagagtgatgatgaacccaag
cgcatcaagaagagcaagatgatcgccaaggccttctccaagcggcgcgagctgctgcag
aaccctggccaggagctgtccttcagcatgcacaccgtctcccacgatgggcctgtggcg
ggtttggcctttgacctcaatgagccctcggcagatgtgtcctctgcctgggcccagcat
gtcaccaagatggtggctcggcgaggagccatactgccccaggatgtgtctgtcacccct
gtggcaaccccagtgcccccggaggaaaaagccaacgtgtggctggttgaggcagagatc
tccccagaactggacaagcgcttgggccggaagaagaaacggaggaagaggaagaaggag
gtgtgcccactggtgccacccgcagtgcttcaccttccagcccctgcccctgcctccagt
gctgttcctcgattgccccagctgccccggcagaagtgcctggtggctgcaagtgcctgg
ggggctggggaatcctgccgccagagagcgtggaccctggtctccaaccccttctgccca
gagcccagttctctgcaggatctgtttctgcccagtgctccagaccccacagcctgggct
cagggctgccggcaggggctggggcccattcattcccgcaccaacctaatggaggcagag
ctcatggatgccgactcagacttctga
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