Manis javanica (Malayan pangolin): 108410310
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Entry
108410310 CDS
T06054
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mjv
Manis javanica (Malayan pangolin)
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mjv04121
]
108410310 (PDZRN3)
Enzymes [BR:
mjv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108410310 (PDZRN3)
Ubiquitin system [BR:
mjv04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
108410310 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
Sina_ZnF
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_4
zf-TRAF
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
CEP104_ZnF
Motif
Other DBs
NCBI-GeneID:
108410310
NCBI-ProteinID:
XP_036875214
LinkDB
All DBs
Position
Unknown
AA seq
1063 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCSQVVKLQQLPEHLERCDFAPARCRHAGCSQV
LMRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAQNGTLQARLGAL
HKAFKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCVASPPGG
KGEETRSLTLVLHRDSGSLGFNIIGGRPCVDNQDGSSSEGIFVSKIVDSGPAAKDGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTSTQT
DITFEHIMALTKMSSPTPPVLAPYLLPEEHPSAHEYYDPNDYIAGLHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEEDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLEDLHMDMLEEQHHQAMQFTA
SVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSTPL
AAQRKLTCSRDTLGSGDLPFSNESFISADCADADDLGIPVDECERFRELLELKCQVRSAG
AYSLYYPSSPLDASKSDPESVDKELELLNEELRSIELECLSIVRAHKMQQLKEQCRESWM
LHDSGFRNYNTSVGVRRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLETSPDNSLR
RAADSVSCPAGEGAAGTTEAYGPTPKNLLSITEDPELGSPSCSPSQELDPSQAVEGKERK
ASDSSGSPSPKLGGSYLSPFPRSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQMSLV
SMCKDLNSANQSEPRMEWKVKIRSDGTRYITKRPVRDRLLRERALKIREERSGMTTDDDA
VSELKMGRYWSKEERKQHVVKAKEQRRRREFMMQSRLECLKEQQGADDRREMNILELSHK
KMMKKRNKKIFDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgatggcgacgtggacccggacctgaagtgcgcgctg
tgccacaaggtcctggaggacccactgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aaatgcgcgcacgcagcgcgcggctgcagccaggtggtcaagctgcagcagctgccggag
cacctcgagcgctgcgacttcgcgcccgcgcgctgtcgccacgcgggctgcagccaggtg
ctgatgcggcgcgacgtggaggcgcacatgcgcgacgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcgggaggccac
tgctgcgcccgggcgttgcgggcgcaaaacggcactctgcaggcacgcctgggcgcgctg
cacaaggcgttcaagaaggaggcgctgcgcgcgggtaagcgcgagaagtcgctggtggcg
cagctggccgcggcgcagctggagctgcagatgaccgccctgcgctaccaaaagaagttc
accgaatacagcgcgcgcctcgactcgctcagtcgctgcgtggcctcgccgcccggcggc
aagggtgaagaaaccagaagcctgactctggtcctgcatcgggactctggctccctggga
ttcaatatcatcggtggccggccgtgcgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaagatagttgacagtgggccggcagccaaggacggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcaactcatgaccaggct
gtggaagctttcaagacagccaaagagcccatcgtggtccaggtgctgaggagaacccca
cggaccaaaatgttcacaccgccatcagagtcgcagctggtggacacgagcacccagacc
gacatcacctttgagcacatcatggccctcactaagatgtcctcccccaccccgcctgtg
ctggctccctatctcttgccagaagagcacccatcagcccatgaatactacgatccaaat
gactacattgcaggccttcatcaagagatggacagagaggagctggagctggaggaggtg
gacctctacagaatgaacagccaggacaagctgggcctcaccgtgtgctaccggacagac
gacgaggaggacatcgggatctacataagtgagatcgaccctaacagcatcgccgcaaag
gacgggcgcatccgagaaggagaccgcattatccagataaatgggatagaggtacagaac
cgtgaagaggctgtggctctcctaaccagtgaagaaaacaagaacttctccttgctgatt
gcaaggcctgaactccagctggacgagggttggatggacgatgacagaaacgactttctg
gaggacctgcacatggacatgcttgaggagcagcaccaccaggccatgcagttcacagcc
agtgtgctccagcagaagaagcacgaagaagacggtgggaccacagatacagccaccatc
ctgtccaaccagcacgagaaggacagtggcgtggggcggaccgacgagagcacgcgcaac
gatgagagctcggagcaggagaacaacggggatgacgccaccgcgtcctccaccccgctg
gccgcgcagaggaagctcacgtgcagccgggacaccctgggcagcggcgacctgcccttc
agcaacgagtccttcatctccgctgactgtgcggacgccgacgacctgggcatccccgtg
gatgagtgtgaacgcttccgcgagctcctggagctcaagtgccaggtgaggagcgccggc
gcctacagcctgtactaccccagcagccccctggacgccagcaagagcgaccccgagagt
gtggacaaggagctggagctgctgaatgaggaactgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcgcacaagatgcagcagctcaaggagcagtgccgcgagtcctggatg
ctgcacgacagcggcttccgcaactacaacaccagcgtgggcgtccgcaggcacgagctc
tcggacatcaccgagctcccggagaagtccgacaaggacagctccagcgcctacaacacc
ggggagagctgccggagcacaccgctcaccttggagacgtcccccgacaactccttgagg
agagcggcagacagcgtcagctgcccggccggcgaaggggctgcggggaccacggaagcc
tacggaccgacccccaagaatctgctctccatcacggaagatcctgagctgggcagcccc
agctgcagcccttcccaagagcttgaccccagccaggccgtggagggcaaggagaggaaa
gccagcgatagcagcgggagccccagcccgaagctgggcggctcctacctgtcgcccttt
ccacgctccccgtacaaacacgcccacatcccagcgcacgcgcagcactaccagagctac
atgcagctgatccagcagaagtcggccgtggagtacgcgcaaagccagatgagcctggtg
agcatgtgcaaggacctcaactccgccaaccagtcggagccgagaatggagtggaaggtg
aagatccgaagcgacgggacgcgctacatcaccaagaggcccgtacgcgaccggctgctg
cgggagcgtgcgctcaagatccgtgaggagcgcagcggcatgaccaccgacgacgacgcg
gtgagcgagctgaagatggggcgctactggagcaaagaggagaggaagcagcacgtggtc
aaggccaaggagcagcggcggaggcgcgagttcatgatgcagagcaggctggagtgcctg
aaggagcagcaaggggccgacgacaggagggagatgaacatcctcgaactcagccacaaa
aagatgatgaagaagaggaataagaagatatttgataactggatgacaatccaagaactc
ttaacccacggcacaaagtcacccgatggcactagagtatacaactccttcttatctgtg
actactgtataa
DBGET
integrated database retrieval system
