Manis javanica (Malayan pangolin): 118969644
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Entry
118969644 CDS
T06054
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03013
Nucleocytoplasmic transport
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118969644
09122 Translation
03013 Nucleocytoplasmic transport
118969644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
118969644
03041 Spliceosome [BR:
mjv03041
]
118969644
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
118969644
Spliceosome [BR:
mjv03041
]
Complex C
Other components
EJC/TREX
118969644
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
118969644
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
118969644
NCBI-ProteinID:
XP_073078285
LinkDB
All DBs
Position
1:5735884..5869278
Genome browser
AA seq
1565 aa
AA seq
DB search
MVAAAVVFPVEWIKNWEKSGRGEFLHLCRVLSENKSHDCSSYRDFQQALYELSCHVVNGN
LKHEHASNVLNDISEFHEDMPSILADVFCILDTETSCLEEKNKRDYFTQLVLACLYLVSD
TVLKELLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKINLLRDENEGYAKLIAELG
QDLSGNITRDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDEFFISLLESYMSMCE
PQTLCHILGSKFKFYQELNGETPSSLYRAAAVLLQFNIIDLDGLYVHLLPDDNCIMDEHK
REIVEAKQIIRKLTMVVLSSKKIDEREKVKEKEEEKVEKPPDNQKLGLLEALLKIGDWPH
AQNIMDQMPPYYAASHKLIALAICRLIHITIEPLYRRVGVPKGAKGSPVNALQTKRAPKQ
AESFEDLRRDVFSMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSHGGKQEDKEKTEVIL
SSLLSITDQVLLPSLSLMDCNACISEELWGLFKTFPYQHRYHLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKHLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDS
LKYLTSLNYDVLAYCIIEALANPEKEKMKRNDTTISSWLQSLASFCGAVFHKYPIDLAGL
LQYVANQLKAGKSFDLLILREVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGCFGQIR
NTKKSSQRLKDALLDHDLALPLYLLMAQQRNGVNFQEGGEKHLKLVGKLYDQCHDALMQF
GGFLASHLSTEDYIKRVPSIDVLCNEFHTPYDAAFFLSRPMYAQHISSKYDELKKSEKGS
KQHHKVHKYITSCEMVMAPVHEAVVSLHVSEVWDDISPQFYATFWSLTMYDLAVPHTSYE
REVNKLKVEMKAMDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRLKLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHXQKIPNFSTLLCYDRV
FSDIIYTVASYTENEACRYGRFLCCMLETVTRWHSDRXTYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFCHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQVLERRVYKICQEEKEKRPDLYAMAMSYSGQLKSRKSYMIPENEFHHKDPSPRNAVASV
QNGPGGGPSPSSTGSASKSDESSNDETDKSRERSQCGVKAVNKASSATPKGNSSNGNICF
NSKSVKENGKEKGKEKEKEKKEKTPATSPEARVLGKDGKEKPKEERPNKDEKAREMKERT
PKSDKEKEKFKKEEKAKDEKFKTTGPNVEXKSTQEKERKKEPSRERDIVKEMKSKENAKG
GEKVSVSGSLKSPVPQSVIAEPEREQKRRKIDTHHSPSYSLTVKDSLIELKKSSAKLYIN
HAPPLSKSKEREMDKKDLDKSRERSREXEKKDEKDRKERKRDHSNNDRQVPPDLTKRQKE
ENGIMGVPKRKSESPCESPYPNEKDKEKMSKSSGKEKSGDSFKSEKMDKISFGKKMRLEW
NCSAV
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atggtggctgctgctgtcgtgtttcctgtcgagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttatgccgtgtcctgagtgaaaataaaagccatgattgttca
tcttatagagatttccagcaagctctttatgagttatcatgccatgtcgttaatggaaat
ctcaagcatgaacatgcatctaatgttcttaatgacattagtgaatttcatgaggatatg
ccttccattcttgctgatgtattctgcatattagatactgagacaagttgtttagaagaa
aaaaacaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaactcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcaattcaatcaaaagtccgttaaaatcaagacaaaactcttttataagcagcaa
aaaatcaatttgttaagagatgagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactcgtgatttaatcttagaaaatatcaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgaattctttatatctttattagaatcttatatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttggatccaagttcaagttttatcaggaactaaatgga
gagaccccttcatctttatacagagctgcagcagtacttctacaatttaatattattgat
ttagatggtctgtatgtacatcttcttccagatgataattgcattatggatgaacacaaa
cgagaaattgtggaagctaagcaaattattagaaaacttacaatggttgtattgtcttcc
aaaaaaattgatgagcgagagaaagtaaaggaaaaagaagaggagaaagtagagaagcca
cctgataaccaaaaacttggtttgttggaagccttgttaaagattggtgattggccgcat
gcccagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaggcttattcacataactattgagccgctctaccgaagagttggcgtt
cctaaaggtgctaaaggctcacctgttaatgctttgcaaactaagagagcaccaaagcaa
gcagagagctttgaagacttgaggagagatgtcttcagtatgttctgttaccttggtcct
catctttctcatgatcccattttattcgcaaaagtggtgcgcattggcaaatcatttatg
aaggagtttcagtctcatggaggcaaacaagaagataaagagaaaacggaagttatcctt
agctctttgcttagtattactgaccaggtactacttccatctctttcgttgatggactgc
aatgcttgtatttctgaggaactgtggggattgtttaaaacatttccatatcagcataga
tatcatctgtatggccaatggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagctcaaacaatagacagagccaaatatatcatgaagcatctaaccaaggaaaat
gtgaagccttctggaagacaaattggaaagttgagccacagcaatccaaccattttgttt
gattatatcttgtcacaaatacaaaagtatgataacttaataacacctgtagtagattca
ttgaaatatctcacttcgttgaattatgatgtcttggcctattgtatcattgaagctcta
gctaatccagaaaaggagaaaatgaaacgcaatgatacaaccatctcaagctggcttcag
agtctggctagtttctgtggtgcggtttttcataaatacccaattgatcttgctggtctt
cttcaatatgtggctaatcagctaaaggcgggcaaaagttttgacctgcttatattgaga
gaagtggtacagaaaatggcaggaatagaaattacagaggaaatgacaatggagcaacta
gaggccatgactggtggagagcagctaaaagctgagggtggctgttttggccagatcaga
aacactaaaaaatcctcccagagactgaaggatgcactattggaccacgaccttgctctt
cctctgtatttgcttatggctcagcagagaaatggggtcaactttcaggaaggtggagag
aaacatctgaaacttgtgggaaagctctatgatcagtgtcatgatgccctgatgcaattt
ggtgggtttttggcatctcatctaagcacagaagattacataaagcgagtgccttcaatt
gatgtgctctgtaatgaatttcatacaccctacgatgcagcatttttcctgtctaggcca
atgtatgcacagcacatttcgtcaaagtatgatgaacttaaaaaatcagaaaagggaagt
aaacagcatcataaagttcataagtacattacatcatgtgaaatggtgatggctcctgtc
catgaagcagtggtctccttacatgtttccgaggtctgggatgacatcagccctcaattt
tatgccacattctggtcattgacgatgtacgaccttgcagttccacataccagctatgaa
cgggaagtcaataaacttaaagtcgagatgaaagccatggatgacaatcaggaaatgcct
ccaaataaaaagaaaaaagagaaggagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaaaaaacagatggaacatgtacagcgagttctacagagactgaaactggaaaag
gacaactggcttttagcgaaatctaccaaaaatgagaccatcacaaaatttctacagctg
tgtatatttcctcgatgtattttttcagcaattgatgctgtttactgtgctcgttttgtt
gaactggtgcattaacagaaaattccaaatttttccacacttctttgctatgatcgtgtt
ttctctgacataatttacacagttgcaagctatactgaaaatgaagcttgtcgatatggg
agatttctttgctgcatgttagaaactgtgaccaggtggcacagtgacagcacatatgaa
aaggaatgtggaaattatccaggattcctcactatattacgggcaactggatttgatgga
ggaaataaagctgatcaattagactatgaaaatttttgtcatgttgtacataaatggcat
tacaaattaaccaaggcatcggtgcattgccttgaaacaggtgagtatactcacatcagg
aatatcttgattgtgctaacaaaaatacttccttggtacccaaaagtattgaatctgggt
caggttttggaaagaagagtatataaaatctgccaagaagaaaaagagaagaggccagat
ctatatgcaatggctatgagctactcggggcagttgaaaagtagaaagtcatacatgata
cctgaaaatgagtttcatcacaaagacccctctccgaggaatgcagttgccagtgtacaa
aatgggcctggtggtgggccttctccatcatcgacaggaagtgcatctaaatctgatgaa
agcagtaatgatgagactgataaatcaagggagagatctcagtgcggtgtgaaagctgtt
aataaagcttctagtgctacaccaaaaggaaattcaagcaatggaaatatttgctttaac
agcaaatctgttaaagaaaatggcaaggagaaagggaaagagaaagaaaaagagaaaaaa
gaaaagactccagctacgagtccagaggccagggtacttggtaaagatggtaaagaaaaa
ccaaaggaagaacggccaaataaagatgaaaaagcaagagaaatgaaggaaagaacacct
aagtctgacaaagagaaagaaaaattcaagaaagaagaaaaagctaaagatgagaaattc
aagaccaccggccccaatgtagaataaaaatctactcaagaaaaggaaagaaaaaaggag
ccatccagagaaagagatatagtaaaggaaatgaaatcaaaggaaaatgctaaaggagga
gaaaaagtatctgtttctgggtccttaaagtcacctgttccccaatcagttattgcagag
cctgaaagggaacaaaaacgccgcaaaattgatacacaccattctccatcatattccttg
acagtaaaggacagtctcatcgaactcaagaagtcttcagcaaagctctacattaatcat
gctccaccactgtccaagagtaaggagagagaaatggacaagaaagatttggacaagtca
agggaaagatccagagaagagaaaaaagatgaaaaggacaggaaagagcggaaaagggat
cactcaaacaatgaccgtcaagtaccaccagacttaaccaagagacaaaaagaggaaaat
ggaataatgggggttccaaagcgcaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaatgtcaaaatcttcaggcaaagaaaaaagcggcgattcattt
aaatctgaaaagatggataaaatctcttttggcaaaaagatgagattggaatggaattgt
tcagctgtgtga
DBGET
integrated database retrieval system
