Manis javanica (Malayan pangolin): 140848447
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Entry
140848447 CDS
T06054
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mjv
Manis javanica (Malayan pangolin)
Pathway
mjv03013
Nucleocytoplasmic transport
mjv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mjv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140848447
09122 Translation
03013 Nucleocytoplasmic transport
140848447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mjv03019
]
140848447
03041 Spliceosome [BR:
mjv03041
]
140848447
Messenger RNA biogenesis [BR:
mjv03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
140848447
Spliceosome [BR:
mjv03041
]
Complex C
Other components
EJC/TREX
140848447
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
140848447
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Synaptobrevin
Motif
Other DBs
NCBI-GeneID:
140848447
NCBI-ProteinID:
XP_073088113
LinkDB
All DBs
Position
1:1040107..1156864
Genome browser
AA seq
1659 aa
AA seq
DB search
MPQRRMMSLRRSLEAVEAFLLVVGKASTQPVNVSTRTRSLHLCRVLSENKSHDCSSYRDF
QQALYELSCHVVNGNLKHEHASNVLNDISEFHEDMPSILADVFCILDTETNCLEEKSKSD
YFTQLVLACLYLVSDTVLKERLDPETLESLGLTEQSQQFNQKSVKIKTKLFCKQQKFNLL
REENEGYAKLIAELGQDLSGNITSDLIVENIKSLIGCFNLDPSRVLDVILEVFECRPEHD
EFFISLLESYMSMCEPQTLCHILGSKFKFYQELNGETPSSLYRAAAVLLQFNIIDLDDLY
VHLLPADNCIMAEHKREIVEAKQIVRKLTMVVLSSKKMDERDKEKEKEEEKVEKPPDNQK
LGLLEALLKIGDWPHAQNIMDQMPPYYAASHKLIALAICRLIHITIEPLYRRVGIPKGAK
GSPVNALQTKRAPKQAESFEDLRRDVFSMFCYLGPHLSHDPILFTKVVRIGKSFMKEVRV
GLFHAGFYRALASLPPVCASRARAVRSCRCGLAKASPVAHGSALGSFQRCCPWCMLPLFC
HWACVSGSTPFQSDGGKQEDKEKTEVILSCLLSIADQVLLPSLSLMDCNACISEELWGLF
KTFPYQHRYHLYGQWKNETYNGHPLLVKVKAQTIDRAKYIMKRLTKENVKPSGRQIGKLS
HSNPTILFDYILSQIQKYDNLITPVVDSLKYLTSLNYDVLAYCIIEALANPEKEKMKHDD
ATISSWLQSLASFCGAVFHKYPIDLAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEIT
EEMTMEQLEALTGGEQLKAEGGYFGQIRNTKKSSQRLKDALLDHDLALPLYLLMAQQRNG
VNFQEGGEKHLKPVGKLYDQCHDALMQFGGFLATHLSTEDYIKRVPSIDVLCNEFHTPYD
AAFCLSRPMYAQHISSKYDELKTEKGSKQQHNVHKYITSCEMVMAPVHEAVVSLHVSEVW
DDISPQFYATFWSLTMYDLAVPHTSYEREVNKLKVQMKAIDGNQEMPPNKKKKEKERCTA
LQDKHLEEEKKQMEHVQRVLQRLKLEKDNWLLAKSTKNETITKFLQLCVFPRCIFSAIDA
VYCARFVELVHQQKTPNFSTLLCYDHVFSDIIYTVASYTENEACRYGRFLCCMLETVTRW
HSDRATYEKECGNYPGFLTILRATGFDGGNKADQLDYENFRHVVHKWHYKLTKALVHCLE
TGEYTHIRNILIVLTKILPWYPEVLNLGQVLERRVHKICQEEKEKRPDLYALAMGYSGQL
KSRKSYMITENEFHHKDPSPRTAVASLQNGPGGGPSPSSTGSASKSDESSNDETDKSRER
SQCGVKAVNKAFSATPKGNSSNGNSGSNSSKAVKENDKEKGKEKEKEKEKKEKTPATSPE
ARVLGKDGKGKPKEARPNKDEKARETKERTPKSGKEKEKFKKEEKAKDEKFKTTVPNVES
KSAQEKEREKEPSRERDIVKEMKSKENAKGGEKAPVSGSLKSPVPRSVIAEPEREQKRRK
IDTHHSPSYSSTVKVTAIFPKVPLGSENYASSPVISIHFLQDSLIELKKSSAKLYINHAP
PLSKSKEREMDKKDLDKSRERSREREKKDEKDRKERKRDHSNNDRQVPPDLTKRQKEENG
IMGVPKRKSESPCESPYPNEKDKGKNVKIFRQRKKRRFI
NT seq
4980 nt
NT seq
+upstream
nt +downstream
nt
atgccgcaacgacggatgatgtcactgaggaggagtttggaggcagtagaggctttcttg
ctggtagtggggaaggcttcaacccagccggtaaatgtgtctactaggactaggagtttg
catttatgccgtgtcctgagtgaaaataaaagccatgattgttcatcctatagagatttc
cagcaagctctttatgagttatcatgccatgtagttaatggaaatctcaagcatgaacat
gcatctaatgttcttaacgacattagtgaatttcatgaggatatgccttccattcttgct
gatgtattctgcatattagatactgagacaaattgtttagaagaaaaaagcaagagtgac
tattttacacaattggtattagcatgtttgtatttagtttcagacacagttctaaaggaa
cgcctggatccagaaaccttggaatcattagggcttaccgaacaatcacagcagttcaat
caaaagtcagttaaaatcaagacaaaactcttttgtaagcagcaaaaattcaatttgtta
agagaagagaatgaaggttatgcgaagctgattgctgaattggggcaagatttatctggc
aatattactagtgacttaatcgtagaaaatatcaaatctttaataggatgctttaatctg
gatcccagtagagttttggatgtcattttagaagtgtttgaatgcaggccagaacacgat
gaattctttatatctttattagaatcttatatgagtatgtgtgaaccgcaaacactgtgt
catatacttggatccaagttcaagttttatcaggaactaaatggagagaccccttcatct
ttatacagagctgcagcagtacttctacaatttaatattattgatttagatgatctttat
gtacatcttcttccagctgataattgcattatggctgaacacaaacgagaaattgtggaa
gctaagcaaattgttagaaaacttacaatggttgtattgtcttccaaaaaaatggatgag
cgagacaaagaaaaggaaaaagaagaggagaaagtagagaagccacctgacaaccaaaaa
cttggtttgttggaagccttgttaaagattggtgattggccgcatgcccagaacattatg
gatcagatgcctccatactatgcagcttcacataagctaatagcccttgctatttgcagg
cttattcacataactattgagccgctctaccgaagagttggcattcctaaaggtgctaaa
ggctcacctgttaatgctttgcaaactaagagagcaccaaaacaagcagagagctttgaa
gacttgaggagagatgtcttcagtatgttctgttaccttggtcctcatctttctcatgat
cccattttattcacgaaagtggtgcgcattggcaaatcatttatgaaggaggtgcgcgtg
gggctcttccacgcaggcttctaccgggctctggcttcactgccgccggtgtgcgcgagc
cgtgcccgggctgttcggtcgtgccgctgcgggctagcaaaagcctctcctgtggcacac
ggatctgctctcggttccttccagcgctgctgtccctggtgcatgctgccactcttctgc
cactgggcctgtgtttcggggtccacgccatttcagtctgatggaggcaaacaagaagat
aaagagaaaacggaagttatccttagctgtttgcttagcattgctgaccaggtactactt
ccatctctttcgttgatggactgcaatgcttgtatttctgaggaactgtggggattgttt
aaaacatttccatatcagcatagatatcatctgtatggccaatggaagaatgaaacttat
aacggtcacccacttttagtaaaagttaaagctcaaacaatagacagagccaaatatatc
atgaagcgtctaaccaaggaaaacgtgaagccttctggaagacaaattggaaagttgagc
cacagcaatccaaccattttgtttgattatatcttgtcacaaatacaaaagtatgataac
ttaataacacctgtagtagattcattgaaatatctcacttcgttgaattatgatgtcttg
gcctattgtatcattgaagctctagctaatccagaaaaggagaaaatgaaacacgatgat
gcaaccatctcaagctggcttcagagtctggctagtttctgtggtgcggtttttcataaa
tacccaattgatcttgctggtcttcttcaatatgtggctaatcagctaaaggcgggcaaa
agttttgacctgcttatattgaaagaagtggtacagaaaatggcaggaatagaaattaca
gaggaaatgacaatggagcaactagaggccttgactggtggagagcagctaaaagctgag
ggtggctattttggccagatcagaaacactaaaaaatcctcccagagactgaaggatgca
ctattggaccacgaccttgctcttcctctgtatttgcttatggctcagcagagaaatggg
gtcaactttcaggaaggtggagagaaacatttgaaacctgtgggaaagctctatgatcag
tgtcatgatgccctgatgcaatttggtgggtttttagcaactcatctaagcacagaagat
tacataaagcgagtgccttcaattgatgtgctctgtaatgaatttcatacaccctacgat
gcagcattttgcctgtctaggccaatgtatgcacagcacatttcgtcaaagtatgatgaa
cttaaaacagaaaagggaagtaaacagcagcataacgttcataagtacattacatcatgt
gaaatggtgatggctcctgtccatgaagcagtggtctccttacatgtttccgaggtctgg
gatgacatcagccctcaattttatgccacattctggtcattgacaatgtacgaccttgca
gttccacataccagctacgaacgggaagtcaataaacttaaagtccagatgaaagccatt
gatggcaatcaggaaatgcctccaaataaaaagaaaaaagagaaggagcgctgtactgcc
cttcaggacaagcatcttgaagaagaaaaaaaacagatggaacatgtacagcgagttcta
cagagactgaaactggaaaaggacaactggcttttagcgaaatctaccaaaaatgagacc
atcacaaaatttctacagctttgtgtatttcctcgatgtattttttcagcaattgatgct
gtttactgtgctcgttttgttgaactggtgcatcaacagaaaactccaaatttttccaca
cttctttgctatgatcatgttttctctgacataatttacacagtcgcaagctatactgaa
aatgaagcttgtcggtatgggagatttctttgctgcatgttagaaactgtgaccaggtgg
cacagtgatagagccacatatgaaaaggaatgtggaaattatccaggattcctcactata
ttacgggcaactggatttgatggaggaaataaagctgatcaattagactatgaaaatttt
cgtcatgttgtacataaatggcattacaaattaaccaaggcattggttcattgccttgaa
acaggcgaatatactcacatcaggaatatcttgattgtgctcacaaaaatacttccttgg
tacccagaagtattgaatctgggtcaggttttggaaagaagagtacataaaatctgccaa
gaagaaaaagagaagaggccagatctatatgcattggctatgggctactcagggcagttg
aaaagtagaaagtcatacatgataactgaaaatgagtttcatcacaaagacccctctcca
aggactgcagttgccagtctacaaaatgggcctggtggtgggccttccccatcatcgaca
ggaagtgcatctaaatctgatgaaagcagtaatgatgagactgataaatcaagggagaga
tctcagtgtggtgtgaaagctgttaataaagcttttagcgctacaccaaaaggaaattca
agcaatggaaatagtggctctaacagcagcaaagctgttaaagaaaatgacaaggagaaa
gggaaagagaaagaaaaagaaaaagagaaaaaagaaaagactccagctacgagtccagag
gccagggtacttggtaaagatggtaaaggaaaaccgaaggaagcacggccaaataaagat
gaaaaagcaagagaaacgaaggaaagaacacctaagtctggcaaagagaaagaaaaattc
aagaaagaagaaaaagctaaagatgagaaattcaagaccaccgtccccaatgtagaatca
aaatctgctcaagaaaaggaaagagagaaggagccatccagagaaagagatatagtaaag
gaaatgaaatcaaaggaaaatgctaaaggaggagaaaaagcacccgtttctgggtcctta
aagtcacctgttccccgatcagtcattgcagagcctgaaagggaacaaaaacgccgcaaa
attgatacacaccattctccatcatattcctcgacagtaaaggttacagccatatttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttctg
caggacagtctcatcgaactcaagaagtcttcagcaaagctctacattaatcatgctcca
ccactgtccaagagtaaggagagagaaatggacaagaaagatttggacaagtcaagggaa
agatccagagaaagagagaaaaaagatgaaaaggacaggaaagagcggaaaagggatcac
tcaaacaatgaccgtcaagtgccaccagacttaaccaagagacaaaaagaggaaaatgga
ataatgggggttccaaagcgcaaaagtgaaagtccatgtgagtctccttatccaaatgag
aaagacaagggaaaaaatgtcaaaatcttcaggcaaagaaaaaagcggcgattcatttaa
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integrated database retrieval system
