KEGG   Methanopyrus kandleri: MK0005
Entry
MK0005            CDS       T00078                                 
Name
(GenBank) Replication factor C (ATPase involved in DNA replication)
  KO
K04800  replication factor C large subunit
Organism
mka  Methanopyrus kandleri
Pathway
mka03030  DNA replication
Brite
KEGG Orthology (KO) [BR:mka00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    MK0005
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mka03032]
    MK0005
DNA replication proteins [BR:mka03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (archaeal)
    RFC (replication factor C)
     MK0005
SSDB
Motif
Pfam: AAA RCF1-5-like_lid AAA_11 RuvB_N AAA_16 DNAX_ATPase_lid AAA_30 Rad17 AAA_6 AAA_22 AAA_5 AAA_19 DUF815 nSTAND3 AAA_assoc_2 TIP49 AAA_28 IPT AAA_33 AAA_25 NACHT RNA_helicase TSNR_N Zeta_toxin ATPase NPHP3_N Parvo_NS1 Gp44_lid Hydin_ADK AAA_7 DUF6630
Other DBs
NCBI-ProteinID: AAM01222
UniProt: Q8TZC5
LinkDB
Position
complement(3811..5343)
AA seq 510 aa
MVPWVEKYRPRSLKELVNQDEAKKELAAWANEWARGSIPEPRAVLLHGPPGTGKTSAAYA
LAHDFGWDVIELNASDKRTRNVIEKIVGGASTSRSLLRMTREAGGDYEHVEGHSDRVLVL
VDEVDGIDPREDRGGVTALTRAVRQARNPMVLVANDPWVLPKSLRDAVRMIEFRRLRVND
IVEALRRICEREGIEYEEVALRRIAKRARGDLRAAINDLEALARPTGRVTSDDVEALGWR
DKEITIFEALGRIFNKPPRQARRALWNLDEDPDDVILWIAQNIPRAYRDPEEIARAYDYL
SKADVFSSRAIETGDWRFKYVYATDLMTSGVAAARKGKPPGFVRFQPPKILRKLGTTRKE
REVRNSIAKKIAERMHVSTRRAKMDVISVLEIAFRKVADNPTDRGLEILGGIAGYLELSK
REIGFLCGDPQVAQRVYQRALRVREKLRKIRRERVKGAMESMLERKREESEVEEEAKEIE
EAVEKAEEEEEREEKKKEGGGEQRTLDAFF
NT seq 1533 nt   +upstreamnt  +downstreamnt
ttggtcccttgggttgagaagtaccgacctaggtcgctcaaagagctggtgaaccaggac
gaggccaagaaggagctagccgcatgggcgaacgagtgggcgcgcggtagtattccggaa
ccgcgggccgtgctacttcatggaccacccgggaccggaaagacgagcgccgcgtacgcc
ctagcccacgacttcggctgggacgtgatcgaactcaacgcgtcggacaagcgcacacga
aacgtgatcgagaagatcgtgggcggcgcctccacctcacgctccctcctccgaatgacc
agggaagccgggggagattacgaacatgtggagggtcactcggacagggttctagtcctc
gtggacgaggtcgacgggatcgatcccagggaagatagaggtggggtgaccgcgctcacg
cgggccgtacgtcaggcccgtaaccccatggtcctcgtcgccaacgacccgtgggtgtta
cccaagtccctacgtgacgccgttcggatgatcgagttccgccggctccgcgtcaacgac
atcgtcgaggcattacgtcgcatctgcgagcgggagggtatcgagtacgaggaggtggcc
ctgcgtcggatcgcgaagcgtgccaggggagatcttagggctgcgatcaacgatctggag
gcgctcgcaaggcccacgggtagggtaacgtccgatgacgtggaagcgctcgggtggcgt
gataaggagatcaccatcttcgaggctctgggtaggatcttcaacaaaccgcccagacag
gccagacgcgcgctctggaacttagacgaggatccggacgacgtgatcctgtggatagct
cagaacatacctcgagcgtaccgagatccggaggagatcgcccgcgcgtatgattacctg
tccaaagccgacgtattctcgagtcgtgcgatagagaccggggactggaggttcaagtac
gtctacgccaccgacctcatgacgtcgggtgtagccgcggcccggaagggtaaaccaccg
gggttcgttcggttccaacctcccaagatcctgcggaagctggggactacccgcaaagag
cgtgaggtccggaattccatagcgaaaaagatcgcggaacgcatgcatgtgtccacacgc
cgtgccaagatggacgtgatttcagtgctcgagatcgcgttccggaaggtcgcggacaat
cccaccgatcgcggtttggaaatcctaggagggatcgccggctatctagaactctccaaa
cgggaaatcgggttcctctgcggcgatccacaggtggctcagcgggtatatcagcgggcg
ttgcgcgttcgcgagaagctgcggaagatccgcagagagcgggtgaaaggtgcgatggag
tccatgctcgagagaaaacgtgaagaatcggaggtagaagaggaagcgaaggagatcgag
gaagccgtagaaaaagcggaggaagaagaggagagagaggaaaagaagaaggaaggagga
ggtgaacagaggacgttagacgcgttcttctga

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