Methanopyrus kandleri: MK0049
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Entry
MK0049 CDS
T00078
Symbol
rgyB
Name
(GenBank) Reverse gyrase, subunit B
KO
K03170
reverse gyrase [EC:
5.6.2.2
5.6.2.-]
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mka03032
]
MK0049 (rgyB)
Enzymes [BR:
mka01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
MK0049 (rgyB)
DNA replication proteins [BR:
mka03032
]
Prokaryotic type
DNA Topoisomerases
MK0049 (rgyB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim
Helicase_C
DEAD
Topoisom_bac
ResIII
zf_Rg
SNF2-rel_dom
AAA_30
DUF1272
Herpes_UL25
HR1
Hydrolase
DUF1635
Zn_ribbon_6
DUF7575
Motif
Other DBs
NCBI-ProteinID:
AAM01266
UniProt:
F1SVH1
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All DBs
Position
45367..49032
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AA seq
1221 aa
AA seq
DB search
MVLKRAADMVPKGFRDLVEPILDDCADLEELADRVVETEMEPDEVRRRDVGNTDSNEPVA
IFGSSCVLCGGDCSSVRLTSRIGICERCLPVDTETLREVLKEARKRHGYVGEALLMFILV
ERYSPDRVEEFFRRYVWPELFTEIVDRVFDRATGFRLYSAQRVWTRRLVKGCSFSILAPT
GTGKTSWGSLVAAVFGHAGRRVYYLVPTTTLVRQVENRIKGFARDAELDVDVVAYHAAMP
TQAKREALERISSGDFDVLITTAQFLVHRVEDLEKLNFDLILVDDVDAIIRGTGRNVDRV
LRVAGLEQEEIDSAYRLATLRRRYYSLRDWLRSLEDRGDKRAERVREELREVEREIEELE
ELLKRVKKERDLARIVFMSATGAAAPSRRLAVVRELFDFEVGAGGEGLRNIQDIAVISEP
SPEAVERIVRKAGVKGGLIFVPQRLPGEKKAREIVEELAEHLRSSGIEARAIHAGTPAEE
REEAIDGFSEGDVDVLVAVASPYGVIVRGLDLPQAARYAVFYGVPRQRIRLTPREEDLKD
PTYVASALSNLARLLDDRRARSRLEGVAGRLWRIIRRGTWIRERLEEAVEPLSLNTLMKL
AKRDPEDIAEQLDVDRWLARHVQTLAEGVRELTRLLGDPDRVKALAEEATTVAVYEEGEE
AYLEVPDLRTYIQASGRVSRLFAGGVTFGLSFVLCPEDERELRTLNGLIRRMSYTYGSEF
EWRSYPKSLDMKEIGLELKEISDEELEELVRKVDEDRERVRKVLAGELKPEETGRLARSA
LMIVESPNKARMIASLFSQRPSRRRLNGGVAYEAAADGLHLTVVATQGHVADLVEEPGVH
GVLRIDERWVPMYDVLGRCSECGEQVVGSEECPNCGGEVELKTPLLESIRELASEADVIL
IGTDPDTEGEKIGWDVFNYLGWTTAQVYRTEFHEVTRRGISEALKEESWKNVDAGRVSAQ
ILRRVADRWIGFSLSQDLWDVFKHLEIKLGELPSGSRIEVRLDIPSGVEVVDFRRTFDED
SSVRSRSVRLRREGDEYVVRTRISRGGDVTYTATLLDPNRKLGDRNGVRPELVRVRASVN
GEPVDPNVKLEPMTWLSAGRVQTPVLGWIIDRAREYRETEFYACRAEVPADDVTIRALIE
ELKVPRALTEKLDEATIRVLSKIAEEGPDAEFSEEEVGRFTETELFERKDGRYRLSEEGR
KVLESEGVIGLMLHLAGVSGR
NT seq
3666 nt
NT seq
+upstream
nt +downstream
nt
atggtgctgaaacgtgccgcggacatggttccgaaaggattccgggatttagtcgagccc
atcctggacgactgtgctgacttggaggagctagcggatcgcgtcgtcgaaaccgaaatg
gagccagatgaagtacgccgcagagacgttgggaacaccgattctaacgagccggtggcg
attttcggatcctcgtgcgtcctgtgcggaggtgactgctcgtccgtccggctcacctcc
aggataggtatttgcgagcggtgtcttccggtcgatacggagacgctacgcgaagtactg
aaggaagccagaaaacgtcacgggtacgtaggagaggctttactgatgttcatcctggta
gaacgctactcaccggatcgggtggaggaattcttccgtcggtacgtctggccggaactg
ttcaccgagatcgtcgacagggtcttcgaccgggctaccgggttccgactatattcggca
caacgtgtatggacgcggagactggttaaaggttgcagtttctcgatactggccccgacc
ggtaccggcaagacctcttggggctcgttagtagcggcggtgttcggacatgccggacgc
agggtgtactacctagtcccaaccacaactctggtccggcaggtcgaaaataggatcaag
ggattcgcgcgcgacgccgaactggacgtcgatgtagtcgcgtatcacgcggctatgccc
acccaagctaaacgagaggctttagaacgtatctcttccggagatttcgacgttctgatc
actacggcgcagttcttggttcaccgtgtggaggacctcgagaagctgaacttcgatctg
atcttagtggacgacgtggacgcgatcatccggggtaccggacgcaacgtcgaccgcgtg
ctccgcgtcgccggactcgagcaggaggagatcgatagcgcgtacaggttggctaccctc
cgacggcgctactactcactccgagattggcttcggtcgttggaagaccgcggagacaag
cgcgcggagcgtgtccgggaggaactccgagaggtcgagcgcgagatcgaggagctcgag
gaactgttgaagcgggttaaaaaagagcgcgatctcgcacggatcgtgttcatgagcgcg
acgggagccgcggccccctccagacgtctcgccgtggtccgagagctcttcgatttcgag
gtcggagcgggcggggagggtctccgtaacattcaggacatcgcggtgatctccgagccg
tccccggaagccgtggaacggatcgtccggaaagccggcgtgaagggaggtctgatcttc
gtcccacagcggttaccgggagagaagaaagccagagagatcgtggaggagctcgcggag
cacctgcggtcttcagggatcgaggctcgagcgattcatgccggaacgcccgccgaggag
cgggaggaggccatcgacggcttctccgaaggggacgtagacgttctggtggccgtagcc
agcccttacggcgtgatagttcgaggtctcgacttaccacaagccgccaggtacgcggtc
ttctacggggtcccccgacagcggataaggctgactccgcgcgaggaagacctcaaggac
ccgacatacgtagcctcggccctgtccaacctggccagactgctggacgatcgcagagcg
aggagtcgcttggagggtgtagcgggtcgactgtggaggatcatcagacgcgggacctgg
atcagggagcggctggaagaggccgtggaaccgctctccttgaatacgctgatgaaactc
gcgaagcgagacccggaagatatcgccgagcaactcgacgtcgacaggtggctggcacgg
cacgttcaaacgttagccgaaggtgtgcgagagctgactcggttgttgggcgaccctgac
cgggtgaaggccctggccgaagaagctacgacggtcgctgtgtacgaagaaggcgaggaa
gcctacttggaggttcccgacctccggacgtacatacaagccagcggtagagttagccgt
ctcttcgccggtggagtgaccttcgggttgtccttcgtcctatgtcccgaggacgaacgc
gagcttcggacactgaacggtctgatccgacgcatgtcctacacctacggttcggagttc
gaatggaggtcctacccgaagtctttggacatgaaggagatcggtctagagctcaaggaa
atttcggacgaggaactcgaggaactcgtgaggaaggtggacgaagaccgggaacgagtc
cggaaggtactcgcaggcgagctgaaaccggaggaaaccggtcgactcgcccgttcagcc
ttgatgatcgtggaatctccaaacaaggcccgcatgatcgcctcgctgttctcccagcgc
ccgtcacgccgcagactgaacggaggggtggcgtacgaagctgcagcggacggtcttcat
ctcaccgtcgtcgccacacagggtcacgtcgccgacttggtcgaagagcccggagtccac
ggtgtgctccggatcgacgaacgctgggtgccgatgtacgacgtcctgggcaggtgtagc
gagtgtggtgagcaggtggtcggttccgaagagtgtccgaactgcggcggtgaagtagag
ctcaagaccccgcttctagagtcgatccgggaactagcctcggaggcggacgtgatactc
atcggaacggacccggacaccgagggagagaagatcggatgggacgtcttcaactacctg
ggctggaccacggcccaggtgtaccgaactgagttccacgaggtcactagacgcggcatc
tccgaggcactgaaggaagagagctggaagaacgtcgatgcaggccgtgtgtcggctcag
attctccggcgagtggccgacagatggatcgggttctcactatctcaggacttgtgggac
gtgttcaagcacctcgagataaagctaggagagctcccatcgggctccaggatcgaggtg
aggctggacatcccgagcggggtagaagtagtagatttccggcgcacgttcgacgaggat
tcctcggtcaggtccaggtcggtgagactgcgccgagaaggcgacgagtacgtggtgcgt
actcgcatcagtcgtggcggcgacgtgacgtataccgcgacgcttctggatccgaacagg
aagctcggagacaggaacggagtgcgaccggagcttgtgcgtgtacgcgcgtccgtcaac
ggtgagccggtcgatccgaacgtcaagctggagccgatgacgtggctgagcgctggtcga
gttcaaaccccagtgctcggatggatcatagatagagcccgagaataccgtgagaccgag
ttctacgcgtgtcgcgcggaggttccggcggacgacgtgaccatccgtgcattgatcgag
gaactgaaggtaccgcgagctctgacggagaagttggacgaagccacgatccgagtgctg
tccaagatcgcggaggagggtcctgacgctgagttctccgaggaagaggtaggccggttc
acagagaccgagctgttcgaacggaaggacggacgctacaggctctcagaggaggggcgg
aaggtgctggaatccgaaggggtcatagggctgatgctgcacctcgcgggggtctccggt
aggtga
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