Methanopyrus kandleri: MK0133
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Entry
MK0133 CDS
T00078
Symbol
truB
Name
(GenBank) Pseudouridine synthase of the TruB family
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mka03016
]
MK0133 (truB)
Enzymes [BR:
mka01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MK0133 (truB)
Transfer RNA biogenesis [BR:
mka03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MK0133 (truB)
Prokaryotic type
MK0133 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
PUA
DKCLD
Pus10_C
Peptidase_M16_C
IF2_N
PUA_3
Motif
Other DBs
NCBI-ProteinID:
AAM01350
UniProt:
Q8TZ08
LinkDB
All DBs
Position
complement(127591..128607)
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AA seq
338 aa
AA seq
DB search
MSGDKDRRLPFDRDREMITKAEVETDPRYGCPPEERPIEEYIMKGVINLDKPAGPTSHEV
VAWVKEIFGLSKAGHGGTLDPKVTGVLPIALEKATKIIQTLLPAGKEYVTIMHLHGDVDE
EELERVVKEFEGTILQRPPLRSAVKRRVRPKKIYYIDILEIDGRDVLMRVGCQAGTYIRK
LCHDIGEALGVGAHMAELRRTRTGPFSEENAVTLHDVKDAYEFWKEEGWEEPLRHVVRPM
EEGLEHLPRIEIRDTAVDAICHGANLAAPGIVRVEKGIQPGDLVAIFTLKGEAVALGVAK
ATWKEMLHADRGIMVDTKRVLMEPGTYPKAWGLKTPGE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgacaaggaccggcggctgccgttcgaccgggatcgggagatgatcacgaag
gccgaggtggagacggacccacggtacggttgtcctcccgaggagcgccctatcgaggaa
tacatcatgaagggtgtcatcaacctggacaagccggccggacccacatcgcacgaggtt
gtggcttgggtgaaggagatcttcgggctgtccaaggcgggtcacggtggtaccctggac
cctaaggtcacgggagtccttccgatcgccctcgagaaagccacgaagataatccagacg
ctgctaccggcgggtaaggagtacgtgacgattatgcatctccacggcgatgtggacgag
gaggagctcgagcgcgttgtgaaggagttcgaggggacgatacttcagcggccaccgtta
cgctcggcagtcaagaggagggtacgtcctaagaagatctactacatcgatattctcgag
atcgacggtcgcgacgtgctgatgagggtcgggtgtcaggctggtacctacattcggaag
ctgtgtcacgacatcggtgaggccttgggtgtcggtgcgcacatggcggagctccggagg
acgaggacagggccgttctcggaggagaacgcggtcacgctccacgacgtcaaggacgcg
tacgagttctggaaggaggagggatgggaagagcccttacgacacgttgtacgaccgatg
gaggaaggtctcgagcacctaccgagaatagagatcagggatacggccgtcgacgccatc
tgccacggagccaacctggctgcgccgggaatcgttagggtggagaaggggatccagccc
ggcgatctagtcgccatcttcacgctgaaaggggaggcggtagcgctgggagtggccaag
gccacttggaaggagatgctacacgcggatcggggtattatggtggacaccaagagggtc
ctgatggagccgggcacgtacccgaaggcttgggggttaaagacccctggagagtag
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integrated database retrieval system
