Methanopyrus kandleri: MK0341
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Entry
MK0341 CDS
T00078
Symbol
sen2_1
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mka03016
]
MK0341 (sen2_1)
Enzymes [BR:
mka01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
MK0341 (sen2_1)
Transfer RNA biogenesis [BR:
mka03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
MK0341 (sen2_1)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
DUF6018
Motif
Other DBs
NCBI-ProteinID:
AAM01556
UniProt:
Q8TGZ7
Structure
PDB
PDBj
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All DBs
Position
333200..333739
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AA seq
179 aa
AA seq
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MLCAGNGGKELPRAKVFEGGSLVSKDYEDLKRRYFGTEHGNVLFLDPFETVYLTEKGEID
PETPEGEPMSVEELLSFFERRRPGFRAGYVVYRDLTERGYVVKSGFKYGGRFRVYEEDPD
REHSKYVVRVVEPDTELSTRDVLRATRLAHSVRKDFVLAVVEDVEEPRIEYVMWRWKRL
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgcgccgggaacgggggtaaggaattgccacgtgctaaggtcttcgaaggaggt
agcttagtctccaaggattacgaggacctgaagcgtcggtacttcggaacggagcacggt
aacgtgcttttcctggatcctttcgaaactgtgtacctgacggagaagggtgagatcgac
ccggagacgccggaaggcgaacccatgagtgtggaagaactgctttctttcttcgagcga
agaaggccggggtttcgggcaggatacgtcgtttatcgggatctcaccgagcggggatac
gtggtgaagtccgggtttaagtacggaggtaggttccgggtgtacgaggaggacccggac
cgggaacactctaaatacgtggtgagagtggtcgagccggacacggaactgtctacccgt
gacgtactgcgggccacacgtttggcacattccgtccggaaagacttcgtcctagccgtc
gttgaggacgtcgaagaaccacgcatcgagtacgtgatgtggcggtggaagaggctgtaa
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