Methanopyrus kandleri: MK0566
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Entry
MK0566 CDS
T00078
Symbol
exo
Name
(GenBank) 5'-3' exonuclease
KO
K04799
flap endonuclease-1 [EC:3.1.-.-]
Organism
mka
Methanopyrus kandleri
Pathway
mka03030
DNA replication
mka03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MK0566 (exo)
03410 Base excision repair
MK0566 (exo)
03450 Non-homologous end-joining
MK0566 (exo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mka03032
]
MK0566 (exo)
03400 DNA repair and recombination proteins [BR:
mka03400
]
MK0566 (exo)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mka04147
]
MK0566 (exo)
DNA replication proteins [BR:
mka03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
MK0566 (exo)
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
MK0566 (exo)
DNA repair and recombination proteins [BR:
mka03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
MK0566 (exo)
Exosome [BR:
mka04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MK0566 (exo)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XPG_I
XPG_N
5_3_exonuc
HHH_5
HHH_2
MvaT_DBD
YqjI_C
SAS4
Motif
Other DBs
NCBI-ProteinID:
AAM01781
UniProt:
Q8TXU4
Structure
PDB
PDBj
LinkDB
All DBs
Position
528389..529435
Genome browser
AA seq
348 aa
AA seq
DB search
MGLAELRELIEPEETDLRALAGREIAIDAFNALYQFLTTIMKDGRPLMDSRGRITSHLNG
LLYRTVNLVEEGIKPVYVFDGEPPDLKRETLERRRERKEEAMEKLRRAKTKEEREKYARQ
VARLDESLVEDAKRLLDLMGIPWVQAPSEGEAQCAYMARCGDVWATGSQDYDSLLFGSPR
LVRNITIVGKRKHPHTGEIIEVKPEIMRLEDVLDQLGLESREQLVDLAILLGTDYNPDGV
PGIGPKRALQLIRKYGSLDELKDTDIWPKIERHLPVEPEKLRRLFLEPEVTDDYELDWDE
PDEEGLVEFLVEERDFSEDRVRRAVERLKEALQELRKGGRQETLDAFF
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
ttgggactagctgaactccgagaactgatcgaacccgaagagacggacctgagagccctc
gccggtcgggagatcgctatcgacgcgttcaacgccctgtatcaattcctgaccacgatc
atgaaggacggacgacctctcatggactcgaggggcaggattaccagccacttaaatggc
ctcctgtataggaccgtgaacttggtcgaagagggtatcaagccggtatacgtgttcgat
ggtgagcccccggacctgaagcgtgaaacgctggagcgtcgacgggaacggaaggaggag
gcgatggagaaactgaggcgggccaaaacgaaggaggagcgggagaagtacgcccgacaa
gtcgccagactcgacgagtcgttggtggaagacgcgaagaggctgttggatctcatgggc
atcccgtgggtacaggccccctcggaaggagaggcgcagtgcgcgtatatggcgaggtgc
ggggacgtatgggcgacaggcagccaagactacgactcgctgcttttcggcagccccagg
ttggttcgcaacatcacgatagtcggaaagcggaagcatccacacaccggcgagatcata
gaggtcaagcccgagatcatgaggttggaggacgtgctcgaccagctgggattggaatcg
agggagcagctggtggacctagcgatccttttgggcacggactacaacccggatggagta
cccgggattggtccgaagcgcgcgctgcagttgatcaggaagtacgggtcgctagacgag
cttaaggacaccgacatctggcctaagatcgagcggcacctgccggtggaaccggagaag
ctcagaaggctcttcctcgagccggaagttacggacgactacgagctagactgggacgaa
cccgacgaagagggactggtcgagttcctggttgaggagcgtgatttctccgaggatcga
gtccgccgcgccgtcgagcgtctgaaggaggcacttcaggagttgcggaagggcggtcgc
caagagaccctggacgcgttcttctga
DBGET
integrated database retrieval system
