Methanopyrus kandleri: MK0685
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Entry
MK0685 CDS
T00078
Symbol
rpoC_2
Name
(GenBank) DNA-directed RNA polymerase largest subunit, the C-terminal part
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
mka
Methanopyrus kandleri
Pathway
mka03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MK0685 (rpoC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mka03021
]
MK0685 (rpoC_2)
Enzymes [BR:
mka01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MK0685 (rpoC_2)
Transcription machinery [BR:
mka03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
MK0685 (rpoC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
Motif
Other DBs
NCBI-ProteinID:
AAM01900
UniProt:
Q8TXI8
LinkDB
All DBs
Position
complement(643555..646416)
Genome browser
AA seq
953 aa
AA seq
DB search
MTLMEEPRVQDPPKYVKRILFGILPPDKIRKMSKVEVTSPETYDEDGYPIEGGVMDTRMG
VIDPGLRCRTCGQPAGRCPGHFGHIELARPVLHPRYAERIKDVLRATCPECGRVKLPEDE
IESYLREVREGIRPVKSVAAEVIDRAEKRESCPHCGAESRKITYQKPTTIMMDDERLWPV
DIRAWLEKIPDEDVEILGFHPERARPEWAVLTVLPVPPVTMRPSIILETGERAEDDLTHK
LVDIVRVNLRLKESLEAGAPEPIIEDQWDLLQYHVTTYIDNEIGGVPVARHRTGGKPLKG
IVQRLKGKEGRFRQNLAGKRVNFSARSVITPDPELDPFTLGVPEAIAKELTVPERVTEWN
IDRLRKLVLNGPNKHPGANYVVKRDGSRIRITDENKEKLAEDLEPGDVVERHLMDGDPVM
FNRQPTLHIQSELGFRVRVMPGKTFRLPAACYMGVGFNADFDGDEMNLHVPQSEEARAEV
RELMGCYVYHLWPPKNGHEDVRNSPIHEAIVGIHLLSRAWIPLREAYQLLEEVKKEGDWF
EPTEVKLKPEAKYRRGFEEEIHELEFVCGQPREGEPLVTGRQLLSVFLPDWLDRVELENA
VCPDDEEHGKVVIEKGRIVRGFLDEKTVHGIMTEIVHRYAAREVARGESYPWFKAAETTL
RAMDKIGRLGLRFVTRYGFTLGIDEFEDIYERFRDEVERLCDEAAKKAKEIIERGERRLQ
ELEEHETCNRSRIERGEMLERNIESEVMAILNQPRVETERLLKKHRDLFNPAYIMPESGA
RGSITNIARMALIGGQQAVMGERPHRAKHNTEHIMEKIVNYSYTDRVTPHFEKSLIPGVK
EGGFVRSGFFEGLDMVEYFLHAMSGREGLIDKGFRTADSGYLHRRYVTTALDLIVDSGGR
VRDSANNVIQLTYGEDGVDPAKKWGLNLDVEKALKVVKEVVLEEERRVRGGAG
NT seq
2862 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgatggaggaacctcgcgttcaagatccacccaagtacgtgaagcgcatcctg
ttcgggatcctaccgcccgacaagatccggaagatgtccaaggtcgaggtaactagcccg
gagacgtacgacgaggacgggtacccgatcgaaggaggcgtgatggacaccaggatgggc
gtcatcgaccccggactcaggtgtcggacgtgcggtcagccggccggtcgctgccctggt
cacttcggccatatagagctcgcccgcccggtcctgcaccccaggtacgcggagaggatc
aaggacgtactgcgggccacgtgcccggagtgtgggagggtcaagctaccggaggacgag
atcgagagttacctccgggaggtcagggaaggtatcaggcccgtcaagtcggtggcggcg
gaggtgatagaccgggccgagaagcgtgaatcgtgcccgcactgcggcgccgaatccagg
aagatcacgtatcagaagcccacgacgattatgatggacgacgagcggctgtggcccgtg
gacatacgcgcgtggttggagaagatccccgacgaggacgtcgagatcctgggtttccac
ccggaacgggcgaggccggagtgggctgtcctgacggtcctgccggtgcctcccgtgacc
atgagaccctcgatcatcctggagaccggcgaacgtgccgaggacgacctgacgcacaag
ctcgtggatatcgtccgggtgaacctcaggctgaaggagtcgctcgaggcgggtgccccc
gagccgatcatcgaggaccagtgggacctgctgcagtaccacgtcaccacgtacatcgac
aacgagatcggtggagtacccgtcgccaggcaccggaccggcggcaagccgctgaaaggt
atcgtgcagcggttgaagggtaaggaaggtcggttcaggcagaacctggccggtaagcgt
gtcaacttctcggccagatccgtcatcacacccgatccggagctcgacccgttcacgttg
ggtgtccccgaggccatcgccaaggagctgaccgttccggagcgggtcaccgagtggaac
atcgaccggctccggaagttggtactcaacggtccgaacaagcacccgggagccaactac
gtggtcaagcgggacgggagccggatcaggatcaccgacgagaacaaggagaagctcgcg
gaagacctggaacccggcgacgtcgtcgagcgccatctcatggatggagacccggtgatg
ttcaaccgacagccgacgctacacatccagtcggagctcggcttccgcgtgagggtaatg
cccggtaagacgttcagactgcccgcggcgtgttatatgggagtggggttcaacgcggac
ttcgacggcgacgagatgaacctgcacgtgccacagtccgaggaggctcgagccgaggtc
agggagttgatgggttgttacgtgtaccacctgtggccgcctaagaacgggcacgaggac
gtccgtaacagccccatccacgaggcgatcgtcggtatccacctgctgtcgagggcgtgg
ataccgctccgagaggcctaccagctcctggaggaggtgaagaaggagggtgactggttc
gagcccacggaggtgaagctgaaacccgaggctaagtaccggcgtgggttcgaagaggag
atacacgagctcgagttcgtttgcgggcaacccagggagggtgagccgctcgtaaccggc
cgacagctgctgagcgtcttcctcccggactggctggacagagtggagctggagaacgcg
gtctgtccggacgacgaggagcacggtaaggtggtaatcgagaagggacgcatcgtgcgg
gggttcctggacgagaagaccgtccacggtatcatgaccgagatcgtccaccgctacgcg
gccagggaggtagcgaggggcgagtcgtacccgtggttcaaggccgccgagaccacactg
agggccatggacaagatcggtcgactcggtctccggttcgtgacgaggtacgggttcacg
ctgggtatagacgagttcgaggacatctacgagaggttccgggacgaggtggagcggctg
tgtgacgaggccgctaagaaggcgaaggagatcatcgagcggggcgagcggaggctccag
gagctcgaggagcacgagacctgcaaccggagccggatcgagcgcggtgagatgttggag
aggaacatcgagagcgaggttatggccatcctcaaccagccgcgagtggagaccgagaga
ctgctgaagaagcaccgtgacctgttcaacccggcgtacatcatgccggagtcgggtgcg
cgtggaagtatcaccaacatcgcgaggatggccctgatcggcggtcagcaggccgtgatg
ggtgagcgtccacaccgggcgaagcacaacacggagcatatcatggagaagatagtgaac
tactcgtacacggaccgcgtgacaccgcacttcgagaagagcctcatcccgggtgtgaag
gagggaggctttgtccgctccggcttcttcgaggggctggacatggtcgagtacttcctg
cacgcgatgagcggtcgagagggtctcatcgacaagggcttcagaacggcggactcgggc
tatctacaccgacgctacgtgaccaccgccctggacctgatcgtggactccggagggcgc
gtgcgcgacagcgccaacaacgtcatccagctgacgtacggtgaagacggcgtagatccc
gccaagaagtggggcttgaacctggacgtcgagaaggcgctgaaggtcgtgaaggaagtg
gtgctggaggaagagagaagagtgaggggaggcgcgggatga
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