Methanopyrus kandleri: MK0690
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Entry
MK0690 CDS
T00078
Symbol
sbcC
Name
(GenBank) SMC1-family ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mka03400
]
MK0690 (sbcC)
DNA repair and recombination proteins [BR:
mka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MK0690 (sbcC)
Archaeal homologous recombinant proteins
MK0690 (sbcC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_15
AAA_23
SMC_N
AAA_21
AAA_13
NPV_P10
Rad50_zn_hook
ATG17_like
DUF1664
BLOC1_2
FKBP15
Nuf2_DHR10-like
GAS
AAA_27
Snapin_Pallidin
CCDC39
COG6_N
COG3_N
ABC_tran
AAA_29
EzrA
LEKR1
KIF21A_4th
MscS_porin
IFT57
Spectrin
DUF8567
Occludin_ELL
CENP-F_leu_zip
T4SS_LegC2C7
SbcC_Walker_B
Sec8_N
SesA
DUF4763
MAD
Kebab_C
TPR_MLP1_2
AAA_30
TACC_C
Exonuc_VII_L
HAUS1
MTUS1_CCDC69_CC2
BST2
SPC25_N
ABC_ATPase
AAA_22
nSTAND3
FlaC_arch
DUF3450
CCDC89
MukB
DUF1843
KxDL
Spectrin_Anc-1
Rod_CreS
Motif
Other DBs
NCBI-ProteinID:
AAM01904
UniProt:
Q8TXI4
LinkDB
All DBs
Position
complement(650789..653419)
Genome browser
AA seq
876 aa
AA seq
DB search
MIERVKIENLRSHSSTEIEFREGINVLVGPNGAGKTTVLEAITLALFPRTFRSYDHMIRE
GERRAVVEVVFWGADGHKYKVRREFYRGGGQRNPRLYREEGDGWKVVASGRAEDVDREVM
NALGGVDRDVFREAVYIRQGEIAKLVEATREERKRIVDRTLGLAEFKKAREQAHELLRVA
EAKLETFRERVRDLKGSKKELKRVERELEELKREVKELEPEVEELKERLNELREAKREFE
RLEGELRLLENKIESLKGRRDDLRKLVEEGKEAERELQRLGDVPSKVRELENEEAELRRR
IEELRNLLDDLRSLRNRLESAEEELEGVKRELEELKDEAGVDPERLVEFKDKIVEASERL
RDLRREEELKRKLEKVSDELSELGDREETLQSEYEELQERLDEIQGELKEIRVKEKELLE
RIESLREAEGECPVCLRKLPRERAEKLLRDAEKELERLQGREEDLRKERRELKDRLESVR
RELEGTKERMWRLRERREELERELEEIEELKEELADLSRELGVEEDRLPELRDLAVRAES
LLRDLERRRGDVLRLEKELERTLDRCEKVIGRTPSGVEDVEEELRRLEEERDHVGQKLRE
AEGELERYHNLEEKVKRAREARKELKRIERDLEDAKGRLEQVERNLEGLRERYGSEDRLE
EELESVEKKYERVRDKLSEVKGRLNGMEKRREELKKQVRKYREAKERKERLERVVEVLSL
CKEVFRYSRDVAREKVLPAVEREASKILQDLSDRYGSLRIEDDGAVIRVSVPGGHFIEAD
RMSGGEKIIIGLALRLALAMVGSSFAPFIMLDEPTVHLDAEHRERLAQALRELDLGKGRV
RQAIVVTHDEELEDAADELWRIENRAGESRVERYSG
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcgtgtgaagatagagaacctgaggtcccacagcagcaccgagatcgagttc
cgcgagggcatcaacgtactcgtaggtccgaacggcgccggtaagaccaccgtgctggag
gccatcaccctggccctcttcccgcgcacgttccggagctacgaccacatgatcagggag
ggcgagcgcagggccgtggtggaagtcgtgttctggggcgcggacgggcacaagtacaag
gtgcggcgcgagttctaccggggcggtgggcagaggaacccgagactgtacagggaggag
ggtgacggttggaaggtcgtggcctcggggcgggccgaggacgtcgaccgagaggtcatg
aacgcgctgggtggagtggaccgggacgtgttccgggaggcggtgtacatcaggcagggt
gagatcgcgaagctcgtggaagcgacgcgggaggagaggaagaggatcgtcgacaggacg
ctcgggttggcggagttcaagaaggcccgcgagcaggcacacgagctgctccgggtggcg
gaagccaagctcgagaccttccgcgagcgcgtccgcgacctgaaggggtcgaagaaggag
ctcaagagggtcgagcgggagctcgaggagctgaaacgagaggtgaaggagctggagccc
gaggtcgaggagcttaaggagcgactgaacgagctgcgcgaggcgaagagagagttcgag
aggctggaaggcgagctacgactgcttgagaacaagatcgagagccttaagggacgtcgt
gacgatctccggaagctggtcgaagaaggaaaggaagccgagagggagctgcagagactg
ggtgatgttccttccaaagtacgtgagctcgagaacgaggaggcggaactacggagacgc
atcgaggagctgaggaacctcctggacgacctccgcagtctccggaacaggttggagtcc
gccgaggaggaactcgaaggtgtgaagcgggagctcgaggagctgaaggatgaagccggg
gtcgatccggagcgtctggtggagttcaaagacaagatcgtggaggcttccgaacggtta
cgtgacctgaggcgtgaagaggagctcaagaggaagctggagaaagtctccgacgagtta
agcgagctgggggaccgggaggagacgctgcagagcgagtacgaggagctccaagagcgt
ctcgacgagatccaaggggaactgaaggagattagggtcaaagagaaggagctcctggaa
cgcatcgagagtctcagggaggccgagggcgagtgtcccgtctgcctccggaaactgcca
cgagagcgcgccgagaagttgttgcgtgatgcggagaaggagctcgaacgtcttcaaggg
cgtgaggaggatctacggaaggaacggagagagctgaaagataggctcgagtcggttagg
agggagttggagggtaccaaggaaaggatgtggcgtcttagggagcgtcgtgaggagctc
gagcgggagttggaggagatcgaggagctcaaggaggaactcgcggacttatcgcgcgag
ctgggtgtggaagaagatcggttacccgagctgcgcgatctggccgtgagggcggagagt
ctgctgagagacctggagcgtcggcgcggggacgtgctccggctggagaaggaactggaa
cgtacgctggaccgttgcgagaaagtaatcggaagaacgccgagcggtgtggaagacgtc
gaagaggagctacgacgcctcgaggaggagcgagatcacgtagggcagaagctccgagag
gcggagggggagctcgaacgttatcacaacctggaggagaaggtgaagagggctcgggaa
gcccgtaaggagttgaagaggatcgaacgagatctcgaagatgctaagggtaggttagag
caagtggagcgtaatctcgaggggttacgggaacgctacgggtccgaggatcgactggag
gaggaactcgagagcgtcgaaaagaagtacgagagggtcagggataagctgagcgaggtc
aaaggaaggctgaacggaatggaaaaacgcagagaagagttgaagaaacaggtgcggaag
taccgggaggcgaaggagcgcaaggagaggttggagcgggtcgtggaggtgctcagtctc
tgcaaggaggtgttcagatattcccgtgacgtcgccagggagaaggtgctgcccgccgtg
gagcgggaggcctcgaagatcctgcaggatctctcggaccggtacggatcgttgaggatc
gaggacgacggggccgtgatacgggtctccgtgccgggtggtcatttcatagaggccgac
cggatgagcggtggggaaaaaattataatcgggctggcgctgcgcctggcgctcgccatg
gtggggtcgagcttcgcccccttcataatgttagacgagccgacggtgcacttggacgcg
gaacaccgggagcgattagcgcaagccttaagagagctggatctgggcaaggggcgcgta
cgccaagccatcgtcgtcacccacgacgaggagctcgaggacgccgcggacgagctttgg
aggatagagaaccgggccggcgaatcccgagtagaacgatactccgggtaa
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