Methanopyrus kandleri: MK0690
Help
Entry
MK0690 CDS
T00078
Symbol
sbcC
Name
(GenBank) SMC1-family ATPase involved in DNA repair
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mka03400
]
MK0690 (sbcC)
DNA repair and recombination proteins [BR:
mka03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MK0690 (sbcC)
Archaeal homologous recombinant proteins
MK0690 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SMC_N
AAA_21
AAA_13
NPV_P10
Rad50_zn_hook
ATG17_like
DUF1664
BLOC1_2
GAS
Laminin_II
Nuf2_DHR10-like
Snapin_Pallidin
COG6_N
AAA_27
COG3_N
AAA_29
EzrA
MscS_porin
ABC_tran
DUF948
Spectrin
IFT57
Occludin_ELL
CENP-F_leu_zip
SbcC_Walker_B
DUF5082
Sec8_N
SesA
MAD
DUF4763
TPR_MLP1_2
TACC_C
AAA_30
EXOC6_Sec15_N
FlaC_arch
Exonuc_VII_L
ABC_ATPase
AAA_22
Crescentin
MukB
Med9
DUF3450
Prominin
Motif
Other DBs
NCBI-ProteinID:
AAM01904
UniProt:
Q8TXI4
LinkDB
All DBs
Position
complement(650789..653419)
Genome browser
AA seq
876 aa
AA seq
DB search
MIERVKIENLRSHSSTEIEFREGINVLVGPNGAGKTTVLEAITLALFPRTFRSYDHMIRE
GERRAVVEVVFWGADGHKYKVRREFYRGGGQRNPRLYREEGDGWKVVASGRAEDVDREVM
NALGGVDRDVFREAVYIRQGEIAKLVEATREERKRIVDRTLGLAEFKKAREQAHELLRVA
EAKLETFRERVRDLKGSKKELKRVERELEELKREVKELEPEVEELKERLNELREAKREFE
RLEGELRLLENKIESLKGRRDDLRKLVEEGKEAERELQRLGDVPSKVRELENEEAELRRR
IEELRNLLDDLRSLRNRLESAEEELEGVKRELEELKDEAGVDPERLVEFKDKIVEASERL
RDLRREEELKRKLEKVSDELSELGDREETLQSEYEELQERLDEIQGELKEIRVKEKELLE
RIESLREAEGECPVCLRKLPRERAEKLLRDAEKELERLQGREEDLRKERRELKDRLESVR
RELEGTKERMWRLRERREELERELEEIEELKEELADLSRELGVEEDRLPELRDLAVRAES
LLRDLERRRGDVLRLEKELERTLDRCEKVIGRTPSGVEDVEEELRRLEEERDHVGQKLRE
AEGELERYHNLEEKVKRAREARKELKRIERDLEDAKGRLEQVERNLEGLRERYGSEDRLE
EELESVEKKYERVRDKLSEVKGRLNGMEKRREELKKQVRKYREAKERKERLERVVEVLSL
CKEVFRYSRDVAREKVLPAVEREASKILQDLSDRYGSLRIEDDGAVIRVSVPGGHFIEAD
RMSGGEKIIIGLALRLALAMVGSSFAPFIMLDEPTVHLDAEHRERLAQALRELDLGKGRV
RQAIVVTHDEELEDAADELWRIENRAGESRVERYSG
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgatagagcgtgtgaagatagagaacctgaggtcccacagcagcaccgagatcgagttc
cgcgagggcatcaacgtactcgtaggtccgaacggcgccggtaagaccaccgtgctggag
gccatcaccctggccctcttcccgcgcacgttccggagctacgaccacatgatcagggag
ggcgagcgcagggccgtggtggaagtcgtgttctggggcgcggacgggcacaagtacaag
gtgcggcgcgagttctaccggggcggtgggcagaggaacccgagactgtacagggaggag
ggtgacggttggaaggtcgtggcctcggggcgggccgaggacgtcgaccgagaggtcatg
aacgcgctgggtggagtggaccgggacgtgttccgggaggcggtgtacatcaggcagggt
gagatcgcgaagctcgtggaagcgacgcgggaggagaggaagaggatcgtcgacaggacg
ctcgggttggcggagttcaagaaggcccgcgagcaggcacacgagctgctccgggtggcg
gaagccaagctcgagaccttccgcgagcgcgtccgcgacctgaaggggtcgaagaaggag
ctcaagagggtcgagcgggagctcgaggagctgaaacgagaggtgaaggagctggagccc
gaggtcgaggagcttaaggagcgactgaacgagctgcgcgaggcgaagagagagttcgag
aggctggaaggcgagctacgactgcttgagaacaagatcgagagccttaagggacgtcgt
gacgatctccggaagctggtcgaagaaggaaaggaagccgagagggagctgcagagactg
ggtgatgttccttccaaagtacgtgagctcgagaacgaggaggcggaactacggagacgc
atcgaggagctgaggaacctcctggacgacctccgcagtctccggaacaggttggagtcc
gccgaggaggaactcgaaggtgtgaagcgggagctcgaggagctgaaggatgaagccggg
gtcgatccggagcgtctggtggagttcaaagacaagatcgtggaggcttccgaacggtta
cgtgacctgaggcgtgaagaggagctcaagaggaagctggagaaagtctccgacgagtta
agcgagctgggggaccgggaggagacgctgcagagcgagtacgaggagctccaagagcgt
ctcgacgagatccaaggggaactgaaggagattagggtcaaagagaaggagctcctggaa
cgcatcgagagtctcagggaggccgagggcgagtgtcccgtctgcctccggaaactgcca
cgagagcgcgccgagaagttgttgcgtgatgcggagaaggagctcgaacgtcttcaaggg
cgtgaggaggatctacggaaggaacggagagagctgaaagataggctcgagtcggttagg
agggagttggagggtaccaaggaaaggatgtggcgtcttagggagcgtcgtgaggagctc
gagcgggagttggaggagatcgaggagctcaaggaggaactcgcggacttatcgcgcgag
ctgggtgtggaagaagatcggttacccgagctgcgcgatctggccgtgagggcggagagt
ctgctgagagacctggagcgtcggcgcggggacgtgctccggctggagaaggaactggaa
cgtacgctggaccgttgcgagaaagtaatcggaagaacgccgagcggtgtggaagacgtc
gaagaggagctacgacgcctcgaggaggagcgagatcacgtagggcagaagctccgagag
gcggagggggagctcgaacgttatcacaacctggaggagaaggtgaagagggctcgggaa
gcccgtaaggagttgaagaggatcgaacgagatctcgaagatgctaagggtaggttagag
caagtggagcgtaatctcgaggggttacgggaacgctacgggtccgaggatcgactggag
gaggaactcgagagcgtcgaaaagaagtacgagagggtcagggataagctgagcgaggtc
aaaggaaggctgaacggaatggaaaaacgcagagaagagttgaagaaacaggtgcggaag
taccgggaggcgaaggagcgcaaggagaggttggagcgggtcgtggaggtgctcagtctc
tgcaaggaggtgttcagatattcccgtgacgtcgccagggagaaggtgctgcccgccgtg
gagcgggaggcctcgaagatcctgcaggatctctcggaccggtacggatcgttgaggatc
gaggacgacggggccgtgatacgggtctccgtgccgggtggtcatttcatagaggccgac
cggatgagcggtggggaaaaaattataatcgggctggcgctgcgcctggcgctcgccatg
gtggggtcgagcttcgcccccttcataatgttagacgagccgacggtgcacttggacgcg
gaacaccgggagcgattagcgcaagccttaagagagctggatctgggcaaggggcgcgta
cgccaagccatcgtcgtcacccacgacgaggagctcgaggacgccgcggacgagctttgg
aggatagagaaccgggccggcgaatcccgagtagaacgatactccgggtaa
DBGET
integrated database retrieval system
