Methanopyrus kandleri: MK0835
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Entry
MK0835 CDS
T00078
Name
(GenBank) Archaea-specific Superfamily II helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mka03019
]
MK0835
Messenger RNA biogenesis [BR:
mka03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
MK0835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
DR2241
ATPase
Motif
Other DBs
NCBI-ProteinID:
AAM02048
UniProt:
Q8TGZ1
LinkDB
All DBs
Position
794560..797016
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AA seq
818 aa
AA seq
DB search
MITVVFTGYKGGKLRFVLAEGDPEDGAEISIEGHLELSGGGEPVRGVLGGEPTPPDRVLS
ELQKADRKIALPDVAEVVDRVLGEKIEVKELCRRCLASDRVTVLKHGYRFGEVEVCGRCA
REILEEELRFRVPGFSQTLLEKLERLLHELRDIDRVVEMVDPAFDPAEEEEKTRWEIVEA
EDEEEHRLPLTELDIPEELRRVLERMGYQELTPVQTKCVERGLLEGRNLLVVSPTGSGKT
LVAELAGLTEVLREGRKMVYLVPLVALANQKHREFMEKYGRPLGIGVRLQVGAARLKEFS
GPERGPSPRDADIIVGTYEGFDLLLRTGAVDPDDIGVVVIDEVHTLADERGPRLDGLVCR
LKTLTGAQLLGLSATVGNPEELAEYLDAEPIVHNRRPVPLEYHLVINQDRRQKWDRIARL
VESEWETEYSTGYRGQTIVFTYSRRNTHRLADLLNERTGLDVAPYHAGLPYDRRRSIERA
FERGELAAVVTTAALGAGVDFPASQVIFESLAMGIEWLTPREFQQMAGRAGRPGYHDRGK
VVLMVEPGRRYHRSQSETEDKVAFTLLESEPEPVEVEYDDEDEREQVLAHLVSGAAKSPG
ELERVCDESLGFAGDPMRRVKELREMGFVKGLEPTEKGRVAARYFTGPRTVHELSARAGS
DPLRAVASVRPFERFQLSPSIKRAVERVTRMSVPSRLDDALSVIHSERKEVIERLPPKEK
QKLVSLMKELDCGCDAFPHCEHVSQRASELALKVRLEGKSVYAIPRILEGRYGITAYPID
IANWLEEVVRLLECAGEIAEEPEMAAAAEALADPWSER
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
gtgataaccgtagtgttcacggggtacaagggtgggaagctcaggttcgtgctggcagag
ggtgacccggaggacggtgccgagatttcgatcgagggtcacctggagctctccggaggc
ggtgaacccgttcgaggggttctgggcggagaaccgacgccacccgaccgcgtgttaagc
gagctacagaaagcggacaggaagatagccctccccgacgttgcggaggtggtcgatcga
gttctgggggagaaaatcgaggttaaggagctctgtcggagatgcctcgcgtccgatcga
gtgaccgtgttgaagcacgggtaccggttcggtgaagtcgaagtgtgcgggcgctgcgcc
cgtgagattctggaggaggagttgaggttccgagtacccggcttctcccagactcttctc
gagaagctcgagagactcctacatgagctccgcgacatagatcgcgtcgtggagatggtg
gatccggcgttcgatcccgccgaagaagaggagaagacgcggtgggagattgtagaggcc
gaggacgaggaggaacaccgtctcccactgaccgagctcgacatcccggaggaattgcgt
cgagttctcgaaaggatggggtatcaggagctgactcctgtccaaacgaagtgcgtcgag
cgaggactcctcgagggccggaatctgctggtcgtctctcccacgggttccggtaaaacg
ctggtagcggagctcgccggactcaccgaagtcctccgagaaggtcgtaagatggtttac
ctggtaccgctcgtggccctggcgaaccagaagcaccgggaattcatggaaaagtacgga
cgaccgttagggataggtgtcaggctacaggtcggcgcggcgagattgaaggagttctct
ggacccgaacgtggtccgtcgccgcgtgacgccgacatcatagtcggcacctacgagggg
ttcgacctcctccttcgaactggggccgtagatcccgacgatatcggtgtcgtagtaatc
gacgaggtacatacgctggctgacgagagaggtccacgcttggacggtctcgtatgcagg
cttaagacgctaaccggtgcgcagttgttgggtctctcggccaccgtggggaaccccgaa
gaactcgccgagtacttggatgctgaaccgatagttcacaaccgccgccccgtaccccta
gagtaccacctcgtgatcaatcaagatcgccgacagaagtgggatagaatcgccagactc
gtggagtcggagtgggagaccgagtactccacggggtataggggtcagactattgtcttc
acgtattcgcgcagaaacacacatcgattggccgatctcctcaatgagagaacgggacta
gatgtcgccccttatcacgcgggactcccctacgaccggcgccgctccatcgaacgagcc
ttcgaacgcggtgaactggccgcggtcgtaaccacggcagccctcggggccggcgtggat
ttcccggcctcgcaggttatcttcgagagtctggctatgggtatcgaatggctcacaccg
cgcgaattccagcagatggccggtcgtgcgggccgacccgggtatcatgaccgtggtaaa
gtcgttctgatggtcgagccgggccgccgttaccaccgttctcaaagtgagaccgaggac
aaggtggctttcacgctcctcgagtccgaaccggaacccgtagaagtcgagtacgatgac
gaggacgagagagagcaagtgcttgcacacctcgtcagcggggcggcgaagtctccgggc
gagctcgaacgcgtatgtgacgaatcactaggcttcgctggggatccgatgcgtagggtg
aaagagctccgggagatgggtttcgtcaaaggactcgagcctacggagaaaggccgtgtc
gcggctcgctacttcacgggtcccagaaccgtccacgagctgtccgccagggcgggctcg
gatcctctgagggcggtcgcctcggtacgtccgttcgagaggttccagctgtcaccgtcg
atcaagcgtgcggtagaaagggtcacccgcatgtcggttccatcgagactggacgacgct
ctgagcgtgatacactcggagcggaaggaggtgatcgagaggcttccgcccaaggagaag
cagaagctggtctcgctgatgaaggagttagactgtgggtgtgatgccttccctcactgc
gagcacgtcagccagcgcgcgtcggagctcgcgctgaaggtgcggctcgaggggaaatcc
gtgtacgccatccctaggatcttggagggcaggtacgggataacggcgtaccctatcgac
atcgcgaactggttggaggaggtcgtgcggctcttggaatgtgccggtgagatcgcggag
gaaccggagatggcggcggccgctgaggcgctggccgatccgtggtcagaacggtag
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