Methanopyrus kandleri: MK0839
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Entry
MK0839 CDS
T00078
Symbol
spt15
Name
(GenBank) Transcription initiation factor TFIID (TATA-binding protein)
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mka
Methanopyrus kandleri
Pathway
mka03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MK0839 (spt15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mka03000
]
MK0839 (spt15)
03021 Transcription machinery [BR:
mka03021
]
MK0839 (spt15)
Transcription factors [BR:
mka03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
MK0839 (spt15)
Transcription machinery [BR:
mka03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MK0839 (spt15)
RNA polymerase III system
TFIIIB
MK0839 (spt15)
RNA polymerase I system
SL1/TIF-1B
MK0839 (spt15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-ProteinID:
AAM02052
UniProt:
Q8TX38
LinkDB
All DBs
Position
complement(799566..800123)
Genome browser
AA seq
185 aa
AA seq
DB search
MEIQNIVASVDLKGEVNLDECSVILQGEYEPEQFPGLVYRLEDIGTVVLIFRSGKMVCTG
AKNREQIYKSVERVREDLEKKCGVKFHGEPEVEIQNIVASIDFHVPLDLDTIAEVLVGDE
DVEGIEYEPEQFPGLVLRLREPKVAMLLFYSGKAVCTGAKTEEEPEKAVKKIAEKIEKYG
LKLTG
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
gtggagatccagaacatcgtagcatccgtcgacctcaaaggagaggtgaacttggacgag
tgctccgtaatactccaaggggagtacgaaccggaacagtttccgggactcgtatacagg
ctcgaagacatcggtactgtggtattgatcttcagatccgggaaaatggtgtgtaccggt
gccaagaatcgggagcagatttacaagagcgtcgagagggtcagggaagacctggagaag
aagtgcggagtgaagttccacggagaacccgaagtggagatccagaacatcgtagcgtcg
atcgacttccacgtaccactggacctggacacgatcgcggaggtcttggtgggagacgaa
gacgtcgaagggatcgagtacgaaccggagcagtttccagggctggtactgagactgagg
gaacccaaggtggcgatgctattgttctactccggtaaggccgtatgtacgggggctaag
accgaagaggagcccgagaaagccgtgaagaagatcgcggagaagatcgagaaatacggg
ctgaagctcacggggtaa
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