Methanopyrus kandleri: MK0935
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Entry
MK0935 CDS
T00078
Name
(GenBank) Predicted RNA-binding protein, contains THUMP domain
KO
K16930
tRNA(cytosine8) deaminase [EC:
3.5.4.35
]
Organism
mka
Methanopyrus kandleri
Brite
KEGG Orthology (KO) [BR:
mka00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mka03016
]
MK0935
Enzymes [BR:
mka01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.35 tRNA(cytosine8) deaminase
MK0935
Transfer RNA biogenesis [BR:
mka03016
]
Prokaryotic type
tRNA modification factors
Deaminases
MK0935
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
THUMP
PA
Bd3614-deam
Motif
Other DBs
NCBI-ProteinID:
AAM02148
UniProt:
Q8TWU6
Structure
PDB
PDBj
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All DBs
Position
complement(894329..895165)
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AA seq
278 aa
AA seq
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MKVSLAGQTVDVKKILNEIPKRTVTAALLEGGEIVAVEEADDEHAERKLVRRHDVEGKVV
FVTARPCLYCARELAEAGVAGVVYLGRGRGLGPYYLARSGVEVVEVHPDEPLGYDPVDRL
DVLLTFGGNPYLTEEDVAARVYCLLTGRGFDADIAPAPENLSGRVEIMVTRGDPDEAVEL
LKEELPVFRIRRFLISGEFDRDELRERILEDIEPRILDPFAVRARIARAGAFSSSREAEV
FIGDVLTSVGREVNLNDPRTVVTVDVLGPRVSVGVEKR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgagcctagcggggcaaacggtggatgtgaagaagatcctgaacgaaattccg
aaacgcacggtcacagcggccttgctggagggcggagagatcgtagccgtcgaggaagcc
gacgacgagcatgccgagcgtaagttagtacgacgacacgacgtcgaaggaaaggtggtc
ttcgtgaccgccagaccgtgcctctattgcgctcgggaactcgcggaagccggtgtggcg
ggcgtcgtatacctcggccgaggccgaggtctcggtccctactacctggccaggagcggc
gtggaggtggtggaggtccaccccgatgagccgttaggctacgacccggtggaccggttg
gacgtgctcctgacgttcgggggtaacccctatctcaccgaggaggacgtagccgcccga
gtttattgcctgctgacggggcgtggattcgacgccgatatcgccccagcccccgagaac
ctctcaggtcgagtcgagataatggtgaccaggggcgaccccgacgaagccgtcgagctc
cttaaggaagagctccccgtgttccgtatcagacggttcctgatcagcggcgagttcgac
cgtgacgagctcagggaaaggatcctcgaggacatcgaacctcgcatcctcgaccccttc
gccgtcagggcccggatcgcacgagccggggcgttctcctcctcacgtgaagccgaggtg
ttcataggggacgtacttacatccgtcggtcgcgaggttaacttgaacgacccgagaaca
gtcgtcaccgtagacgtcctgggaccgagggtgtccgtcggcgttgagaagcgttga
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