Methylacidiphilum kamchatkense: kam1_1181
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Entry
kam1_1181 CDS
T06102
Name
(GenBank) RNA polymerase primary sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mkc
Methylacidiphilum kamchatkense
Pathway
mkc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mkc00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
kam1_1181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkc03021
]
kam1_1181
Transcription machinery [BR:
mkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
kam1_1181
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
HTH_23
Motif
Other DBs
NCBI-ProteinID:
QDQ42409
UniProt:
A0A0C1RSQ5
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All DBs
Position
complement(1170036..1170932)
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AA seq
298 aa
AA seq
DB search
MRTKLAKSLDLVSNQQHHSAHYEQKFKEELPLILRAKAADAEALEWLAKNSLPIRQQVAR
FYLPNLADQWPDAENVGWIGILDALEKWNENFNIRFLDYAIHHVRNRVRNYANACRATVR
RPASMYRSYRKIERFLEQGLTVEEITELYGCSLHDMEKILHVYSGDLSLHFSALDDSETS
LMDLLVYPDNTAEEEEKEEKLQKLSIALSHLDDISRKIVLYFFGIEGEGAKKRPTAWIAQ
KLRLSRKKVLQLLEKSLNQLKRDFFLFETLNIRHPLPTGISSTMINVNFYNDSSLDYE
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaaactagccaaatctttggatcttgttagtaatcagcaacatcattctgcc
cactatgaacagaaattcaaggaagaacttccacttattcttagagcaaaagctgcagat
gcggaagccttggaatggcttgctaaaaattctttacctataagacagcaagtagctcgt
ttttatttaccaaacttagctgatcaatggcctgatgctgaaaacgttggatggattgga
attcttgatgctcttgaaaaatggaatgagaatttcaatatccgatttttagattatgcc
attcatcatgtgagaaatagggttagaaattatgccaatgcttgtagagctactgttcgc
aggccagcgtcgatgtacagatcgtatagaaaaatagagagatttttagaacaaggacta
accgttgaagagattactgaattatatggatgttctctccatgacatggaaaaaatactc
catgtatactctggagatttaagccttcatttttctgccttagacgactccgaaacctct
ctcatggaccttttggtttatcctgacaatacagctgaagaagaagaaaaagaagaaaag
ctgcagaaactttctattgcgttgtctcatcttgatgatatttctagaaaaatagtatta
tacttttttgggattgaaggagaaggagctaaaaaaagacctactgcctggattgctcaa
aaactaagactttctagaaagaaggttctacaacttttagagaaatctctaaatcaactt
aaaagagatttttttctttttgagactttaaatatccgacatcccctacctactgggata
tcctctacaatgataaacgtcaatttttataacgactcttcattagattacgaataa
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