Methylacidiphilum kamchatkense: kam1_1455
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Entry
kam1_1455 CDS
T06102
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mkc
Methylacidiphilum kamchatkense
Pathway
mkc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mkc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
kam1_1455 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkc03021
]
kam1_1455 (rpoA)
03400 DNA repair and recombination proteins [BR:
mkc03400
]
kam1_1455 (rpoA)
Enzymes [BR:
mkc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
kam1_1455 (rpoA)
Transcription machinery [BR:
mkc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
kam1_1455 (rpoA)
DNA repair and recombination proteins [BR:
mkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
kam1_1455 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
QDQ42677
UniProt:
A0A0C1RWP0
LinkDB
All DBs
Position
complement(1444823..1445836)
Genome browser
AA seq
337 aa
AA seq
DB search
MAIRLGRFEMPRSIVKDETVSNATFGRYIIEPFESGYGHTLGNSLRRILLSSLEGAAIAS
VKIDGVMHEFTSIPGVVEDVIDIVLNLKKVLIKMPDRETRTFRIDVLKEGPVTAADIQVD
PGVEIVNPEQLICTLDQKKHLMMELEVKVGRGFLLGEYNKKPDQSIGVIPIDCLFSPVRH
VKYEVENTRVGQRTDYDRLIFEIWTDGRIGPDEAIVQAAAILQHHLDVFVQFGKEPVEFE
KPKPPVKEEENRLRKILNMSVNEIELSVRAANCLNNANITTVGQLAMKTEAEMLKYRNFG
KKSLNEIKEKLAALGLSLGMKFDPSILEQPEEKTYRE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggctatacgtttaggaagatttgagatgccccgttccatcgtcaaagatgaaacggta
tcgaatgcgacctttggtcgttatatcattgaaccctttgagtcgggatatggtcatacc
ttaggtaattcgttgcgccgtatcctcttgtcatctttagagggagcggccattgcctcg
gtgaaaatcgatggggttatgcacgaatttacctctattcctggggtcgtcgaagatgtg
atagacatcgttcttaatctgaagaaagtcttgattaaaatgccagatagagagactcgg
actttccgcatcgatgtcctgaaagaaggcccagtaactgccgcagatattcaagttgac
ccaggggtggaaatcgtcaatccagaacagctcatttgtacgcttgaccaaaaaaagcat
ttaatgatggaactagaagtgaaggttggaagaggtttcctattaggcgaatacaacaag
aaacccgaccaatccattggggtcattcctatcgattgtcttttttctccagtacgacat
gtgaaatatgaggtggaaaatactcgggttggacagaggaccgattacgatagactcatt
tttgaaatatggaccgatggtagaatagggcctgatgaggcaattgtccaagcagccgct
attctccaacatcatcttgatgtttttgttcaattcgggaaagagccggtggaatttgaa
aaaccaaaaccacccgttaaagaagaagaaaataggcttcgaaagattcttaatatgagc
gtcaatgaaatagaactttcagtcagagcagctaattgcttgaacaacgccaatattact
acggttggtcagctggctatgaagacggaagcggaaatgctgaaatatagaaattttggg
aagaaatccttgaatgagattaaagaaaagcttgccgcgcttggtctttccctaggaatg
aaattcgatccgagtatcttagaacaaccagaggagaaaacatacagggagtaa
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