Methylacidiphilum kamchatkense: kam1_943
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Entry
kam1_943 CDS
T06102
Name
(GenBank) DNA helicase-2/ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mkc
Methylacidiphilum kamchatkense
Pathway
mkc03420
Nucleotide excision repair
mkc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mkc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
kam1_943
03430 Mismatch repair
kam1_943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkc03400
]
kam1_943
Enzymes [BR:
mkc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
kam1_943
DNA repair and recombination proteins [BR:
mkc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
kam1_943
MMR (mismatch excision repair)
Other MMR factors
kam1_943
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
AAA_11
AAA_22
ResIII
T2SSE
Iron_traffic
TPR_TNPO3_IPO13_4th
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QDQ42182
UniProt:
A0A0C1UPR9
LinkDB
All DBs
Position
complement(932524..934425)
Genome browser
AA seq
633 aa
AA seq
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MIDYESELNEEQRKAVTAPLGPILVIAGAGSGKTRTLTYRVSYLIEKQIKPDHILLATFT
NKAAREMLHRVERLVRADTSKIWGGTFHHLCNRILRNHATTIGFEQNFTIIDREDSLSLL
SECIQELNIKHSGKLFPSPEALLEIFSLSVNKVKPLWKIIDESFPHFSAYAEDISKLQKL
FNERKKKSQLVDYDDLLSYTVKLFQENEKICRFYQSYFEYILVDEYQDTSRIQADFIDML
AQRSHQVMAVGDDAQSIYSWRGAEIENILTFPKKYPSALVVNIKTNYRSTPEILALANAA
IEANQLQFPKELKAIRKSLKESKPLLLSCSTAASQSIEIANQIEKFKAQGIDYNEIAILY
RAHFHALEIQLELTRRKIPFEITSGIRFFEQAHIKDICAFLRFYINPYDETAFKRIVKMF
PGVGQKTVSKLWEEYITITGSIEKLNPPKVSSKAWKNWLDLQKILASKEYENNPSKQLEA
ILNGVYMEYLKVLYESYQRRLEDIEGLISFASNYDSTENFLSQVSLLTGVDTAQDEKNGV
RLSTIHQAKGLEWKIVFLIMLCDGLFPSNYSLKHAALLEEERRLFYVAATRAKDQLFLCY
PRSRSFNYRETLYLPSRFVEEIPKNLLVEAKLP
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgattacgaatctgaactcaacgaagaacagagaaaagctgtaaccgctccactt
ggtccaatcctagttattgcaggggctggaagcggaaaaactcgtactttaacctatcgg
gtttcctatctaatcgaaaaacaaatcaaacctgaccatatccttttggccacttttacc
aacaaggccgctagagaaatgctccaccgagttgagcggcttgtaagagcagatacctcc
aaaatttggggagggacttttcatcatctttgcaataggattttaagaaatcacgctaca
accataggtttcgagcaaaactttacgatcatagacagggaagattccctcagtctattg
tctgaatgcattcaagaattgaatataaagcatagcggcaaactttttccttctccagaa
gccttgcttgaaattttctctttatcagtcaacaaagtaaagcctctttggaaaatcatc
gatgagtctttccctcatttttctgcttatgctgaagatatttcaaagcttcaaaaactc
ttcaacgaacggaaaaaaaagtctcaacttgtagattacgacgatctcctatcctatacg
gtaaaactttttcaagaaaatgaaaagatctgccgcttttatcaatcttattttgaatac
attcttgtcgatgaatatcaagataccagtcggattcaagcagatttcatcgatatgctc
gctcaacgctctcatcaagtcatggcggtaggagatgatgctcaaagcatttattcctgg
cgcggtgcagaaattgaaaatatccttacattccctaaaaaatacccatcagctttagtc
gttaacataaagacaaactatcgaagcacccccgaaattttagctttagccaatgcagct
atagaagccaatcagctccaatttccaaaagagttaaaagccattaggaaaagcctcaaa
gaaagcaagccgcttctgcttagctgttcaacggctgcttctcaatcaatagagattgca
aaccagatcgaaaaatttaaagcccagggcatcgattataacgaaatcgctattctctat
agagcacattttcacgcattagaaatccaacttgagttgacccgcagaaagattcctttt
gaaataactagtggcatccgtttttttgaacaagctcatataaaagacatttgtgccttt
ttacgattttatatcaatccatacgatgaaactgctttcaaacgaattgtaaagatgttt
cctggagttggacaaaaaacggtgtcgaaactttgggaagaatatataactatcacaggt
tcaatagaaaaactcaatccccccaaagtctcatcaaaggcatggaaaaattggttagat
ctccaaaaaatattagcttctaaagagtatgaaaataatccttccaaacaactcgaagct
attcttaatggagtgtatatggaatatttaaaagtcctttatgaaagctatcagagaaga
ctcgaagacattgaagggcttattagttttgcttccaattacgattccaccgaaaacttt
ctttcccaggtttccttattaacaggagtggatacagctcaggacgaaaaaaatggggtt
cgtttaagcacgattcatcaagccaaaggattggaatggaaaatagtttttttgattatg
ctgtgcgatggactctttccttccaattattctttaaagcatgccgcactccttgaagaa
gaaagaaggcttttttatgtcgctgcaaccagggcaaaagatcaactttttctatgttat
ccccgcagtaggtcgtttaactatcgagaaactctttatctcccctcacgctttgttgaa
gaaatcccaaaaaatcttttggtcgaagcaaaactgccttaa
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