Marinimicrobium sp. C6131: OOT55_00920
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Entry
OOT55_00920 CDS
T08615
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OOT55_00920 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_00920 (uvrA)
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OOT55_00920 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OOT55_00920 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
AAA_23
AAA_22
DnaJ_CXXCXGXG
AAA_24
Viral_helicase1
nSTAND3
cobW
MMR_HSR1
T2SSE
ExoX-like_C
AAA_25
Motif
Other DBs
NCBI-ProteinID:
UZJ44641
LinkDB
All DBs
Position
complement(210615..213482)
Genome browser
AA seq
955 aa
AA seq
DB search
MDTILVRGARTHNLKNIDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDHVEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PVHGEPLSAQTVSEMVDTVLALPEGTKLMLLAPVIRDRKGEHLHIFEQLKREGFIRARVD
GILVDLDDLPKLDKKKKHTIEVVVDRFKVRPDLQTRLAESFETALNLTEGLAGISFMDGE
QSDQLFSAKHACPVCDYSLSELEPRLFSFNNPAGACPTCDGLGVKQFFDESRVIQNPEAS
LAEGAIRGWDRRNIYYYHMLDSLAEHYGFDIDTPWKKLKAKDRRVVLYGSDDEEIDFSYI
NERGDLYRRRHRFEGVLPNMERRYRDTESSSVREELAKYMSTQSCPSCGGARLREEARNV
FIDEHTLPQMTELPVGEAYDYFSALNFHGSKASIAEKILKELRDRFRFLVDVGLNYLSLN
RSADSLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNERLLRTLTHLRNIGNTV
IVVEHDEDAIRQADHVIDIGPGAGVHGGQVIAQGDVNAIMATDGSITGEYLSGKREIAVP
AERRPVDPDRMFRITGARGNNLKSVTLELPVGLMTCVTGVSGSGKSTLINATLHPLAATE
LNGATTLKAAPYETVEGMDHFDKCVDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQEA
RSRGYKPGRFSFNVRGGRCEACQGDGVTKVEMHFLPDVYVPCDVCKGKRYNRETLEVKYK
GKSIHEVLELTVEEARTFFDPVPAIANRLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLS
RELSKRDTGQTLYILDEPTTGLHFYDIEQLLAVLHRLRDHGNTVVVIEHNLDVIKTADWL
IDLGPEGGSGGGEIIATGTPEAVAEQPQSHTGRFLKPMLKLATKRKKSKKKAEKA
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atggataccattctggttcggggggcgcgcacccataacctcaagaatatcgacctcgac
ataccgcgggacaaactcgtcgtgattaccggcctgtccggctcgggtaagtcctcactc
gccttcgacaccctctacgccgagggccagcggcgctacgtcgaatccctgtccacctac
gcccggcaatttctctccatgatggaaaagcccgacgtcgaccacgtggaagggctgagc
ccggccatctccatcgaacagaaatccacctcccacaatccgcgctccaccgtgggcacc
atcaccgaaatttacgactacctgcgcctgctgtttgcccgcgtgggcgagccgcgatgc
ccggtccacggtgaaccgctgtcggcccagacagtcagcgaaatggtcgatacggtactc
gccctgcccgaggggaccaagctcatgcttctggccccggttatccgggaccgcaaaggt
gagcacctacatatcttcgagcagctgaagcgggagggttttattcgtgcccgggtggac
ggcattctggtggatctggatgatctgcccaagctggacaagaagaaaaagcacaccatc
gaagtggtggtagaccggttcaaagtccggcccgatctgcagacccggcttgccgagtcc
tttgaaaccgccttgaacctgaccgaagggttggccggcatcagctttatggacggcgag
cagagcgaccaattgttctccgccaaacacgcctgtccggtatgcgattacagcctgagt
gagctggagcctcgcctgttctcgttcaacaatcccgccggcgcctgcccgacctgcgac
ggcctgggtgtgaagcagttctttgatgaatcccgggtgatccagaaccccgaggcgtcc
ctggccgaaggtgccattcgcggctgggatcggcgcaatatctactactaccacatgctg
gactcgctggctgagcactacggcttcgatatcgataccccctggaagaagcttaaagcc
aaagaccggcgggtggtgctctacggctcggacgatgaggaaattgacttcagttacatc
aacgagcgcggcgacctctatcggcgcagacaccggttcgaaggcgtccttcccaatatg
gaacggcgctatcgggacaccgaatcctcttcggttcgcgaggaactggccaagtacatg
tccacccaatcctgccccagttgcggcggcgcgcgtctgcgagaggaggcgcgcaatgtg
ttcatcgacgaacacaccctgccccagatgaccgaactgccggtgggggaagcctacgac
tacttcagcgccctcaactttcacggcagcaaggcgagtattgccgagaaaatactcaag
gagctgcgcgaccggttccgttttctggtggatgtgggtctgaattacctgtccctgaac
cgcagcgcggacagcctgtccgggggcgaggcgcagcgaatccgcctggcgagtcagatc
ggtgcaggcctggtgggcgtcatgtacattctggacgagccctcgatcgggctgcaccag
cgcgataatgagcgcttactccgcacgctcacgcacctgcgcaatatcggcaatacggtg
atagtggtcgaacacgatgaagatgccatacgccaggccgaccatgtgatcgatatcggc
ccgggcgccggcgtccatggcggccaggtgatcgcccagggcgacgtcaacgccatcatg
gccaccgacggctcgattaccggggaatacctcagcggcaagcgggaaatcgccgtgccg
gcggaacgtcgtcctgtggaccctgaccgtatgttccgaatcaccggcgcccggggtaac
aacctgaaaagtgtcaccctggagctccctgtgggcctgatgacctgtgtaaccggggta
tcgggttccggaaagtccacactgatcaatgccacccttcacccactggcggcgacggaa
ctcaatggcgccaccacgctcaaagcggcgccctatgaaaccgttgaaggcatggatcac
ttcgataaatgcgtcgacattgatcagagcccgatcggccgcacgccacgctccaacccg
gcaacctataccggtatttttactcccatcagagagctgtttgccggaacccaggaagcc
cgctcacgcggctacaaacccggacgattcagcttcaacgtccgaggcggccgctgcgaa
gcctgccagggagacggcgtcaccaaagtggagatgcactttctgccggacgtctatgtg
ccctgcgacgtgtgcaaaggcaagcgctataaccgcgagacactggaggtgaaatacaaa
ggcaaaagcattcacgaagtgcttgaactgacggtcgaagaagccagaaccttcttcgat
ccggtcccggcgattgccaatcggctgcaaacgctcatggacgtgggactttcctacatc
cggctcggccaggcggcgacgactttgtccggcggggaagcgcagcgggtcaagctctcc
cgcgaactctcaaaacgggacaccggccagaccctctacattctcgatgaaccgactacc
ggcctgcacttttacgatatcgagcagcttctggcagttctgcaccgattgcgggatcac
ggcaataccgtggtggtgattgagcacaatctcgacgtgatcaaaaccgctgactggctt
atcgacctggggccggaaggaggctcgggtggaggggagattatcgccaccggtacgccg
gaagctgttgctgagcaaccacaatcgcacaccggtcggtttctcaaaccaatgctgaag
ctggcgacaaaacgcaagaaaagtaaaaagaaagccgagaaagcctga
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