Marinimicrobium sp. C6131: OOT55_01180
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Entry
OOT55_01180 CDS
T08615
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OOT55_01180
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mke02022
]
OOT55_01180
02035 Bacterial motility proteins [BR:
mke02035
]
OOT55_01180
Two-component system [BR:
mke02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
OOT55_01180
Bacterial motility proteins [BR:
mke02035
]
Pilus system
Twitching motility proteins
OOT55_01180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
FleQ
AAA_16
HTH_30
AAA
Mg_chelatase
AAA_19
Pre_tape_measure
Motif
Other DBs
NCBI-ProteinID:
UZJ44692
LinkDB
All DBs
Position
complement(274305..275681)
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AA seq
458 aa
AA seq
DB search
MSNQRVLVIDDEPDIRELLNITLGRMGIEADCVENLTLAKERLKQSQYALCLTDMRLPDG
NGLELVEFIQQEYPRLPVAVITAHGSIDAAIESMKAGAFDFVSKPVDLTALRKLVSSAIQ
SSQLPPMPLPAECPIIGQSKAIQHLIASIQKLARSQAPVYISGESGVGKELVARSIHKLG
PRADGEFVAVNCGAIPRELMESEFFGHKKGSFTGAHQDKAGLFQVAEGGTLFLDEVADLP
LDMQVKLLRAIQEKAVRPVGGQNEISTDVRILCATHKALDQEVLQGRFRQDLFYRLNVIQ
LRVPPLRERREDIAMLARHILEQLAREVNFPTPQLSQPAMKQLCEYHFPGNVRELENILE
RAFTLCESQVIDPADLHLPDNTDPMGNGMEPANDGAGNHVARCAEYPSLDHYLQEVEKDI
LCNALEQAKWNKTQAAKNLGISFRSLRYRLQKLGLDDD
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaacgcgttctggttattgatgacgagcccgatattcgcgagctgctgaat
atcaccctcgggcggatgggcattgaggccgactgtgtggagaacctgacgttggccaag
gagcgtctgaagcaatcccagtacgccctgtgcctgacagacatgcgcctgcctgacggg
aacggtctggagctggtggaattcattcagcaggaatatccccggttgccggtcgccgtg
attacggcccacggcagtatcgatgccgccatcgaatccatgaaagccggcgcctttgac
tttgtgtccaagccggtcgatctcaccgcattacgcaagctggtcagcagcgccatccag
tccagccagctgccgcccatgccgctgccggcggagtgtccgatcattggccaatccaaa
gccattcagcatctgatcgccagcattcagaagctggcccgttcccaggcaccggtgtat
atctcgggagaatccggggtgggtaaggagctggtggcccgctccatccataaactggga
ccgcgggccgacggtgagttcgtggcggtcaactgtggtgccattccccgggagttgatg
gagagcgagtttttcggtcacaagaaaggcagctttaccggtgcccaccaagataaggcg
gggctgtttcaggttgccgaaggcggcacactgttcctggacgaggtggccgacctgccg
ctggatatgcaggtcaaactgttgagggccatccaggaaaaagccgtgcgcccggtagga
ggccaaaacgaaatcagtacggacgtgcgcatactctgcgccacccacaaagcgctggat
caggaagtgctgcagggccggtttcgtcaggatcttttctatcgactgaatgttattcaa
ttgcgggtgccaccgctgcgggaacggcgggaggatatcgccatgctggcccgccacata
ctcgaacaactggcccgagaggtcaatttccccacgccacagctgagccaaccggccatg
aaacagctctgcgagtatcatttcccggggaatgtccgggagcttgaaaacattctggaa
cgagcgtttacgctctgtgaaagccaggtcatcgacccggctgatctgcacctcccggac
aataccgacccgatgggtaacggcatggaacccgccaatgacggcgcaggcaaccatgtc
gcccgctgcgcggagtacccttctctggatcattatcttcaggaagtcgagaaagacatc
ctgtgcaatgcacttgagcaggccaagtggaataaaacccaagcggcaaaaaacctgggc
atcagcttccggtcactgcgctaccggctacagaaactggggctggacgacgactga
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