Marinimicrobium sp. C6131: OOT55_03930
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Entry
OOT55_03930 CDS
T08615
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke02020
Two-component system
mke02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OOT55_03930
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OOT55_03930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mke03000
]
OOT55_03930
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mke02035
]
OOT55_03930
Transcription factors [BR:
mke03000
]
Prokaryotic type
Helix-turn-helix
Other families
OOT55_03930
Bacterial motility proteins [BR:
mke02035
]
Flagellar system
Flagellar assembly proteins
Others
OOT55_03930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
FleQ
HTH_8
HTH_50
AAA_16
AAA_5
AAA_22
AAA_7
AAA
nSTAND3
HTH_30
ATPase
NCAB1
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
UZJ45214
LinkDB
All DBs
Position
922848..924296
Genome browser
AA seq
482 aa
AA seq
DB search
MWRNTNVLVVDDNEQRRRELGVILQFLGKTVRTTGWVGWQTAHEDAEDSDERGVMAVFLG
ETPRPRELESQLKEIRDWQDDVPVIMLEERTLPESAAPQLARMIIASMTVPPAYNQLLDT
LHRAQLYRQAQQASRRQPTRRPVHLFRSLVGTSRQIQQVRDMMAQVADKDVSVLITGESG
TGKEVVARNLHYNSPRRDKPFVPVNCGAIPAELLESELFGHEKGAFTGAINARAGRFELA
EGGTLFLDEIGDMPLNMQVKILRVLQERCFERVGSNKTTSIDVRVIAATHRDLETMISED
RFREDLFYRLNVFPIELPALKERAEDIPLLINELISRLESEERGSIRFNSAAILSLCRHP
WSGNVRELANLVERMAIMHPYGVVGVQDLPPKYRHVDVVEEDFGTDSEQEALNGQAGYVS
MNDTPLLPEQGIDLREYINNMERELIQQALNDCGGVVARAADRLSVRRTTLVEKMRKYDL
QR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtaacaccaatgttctggttgtagatgacaatgaacaacggcgcagggagctc
ggagtcattctgcagttcttggggaaaaccgtcaggaccaccggttgggtgggttggcaa
accgcccacgaggatgctgaagattcggacgaacgtggcgtcatggcggtgtttctgggc
gaaacgcccaggccccgtgagctggaatcccagcttaaggagattcgtgactggcaggac
gatgtgccggtcatcatgttggaggagcgcacattacccgagtcggcggcgccccaactg
gcccggatgattattgccagcatgaccgttcctccggcctataaccaactactggacacc
ctgcatcgcgcccagctctatcgccaggcacagcaggccagtcgccgccaacccacgcgc
cgcccggtacacctgtttcgcagcctggtgggtaccagccgccagattcagcaggtgcgc
gatatgatggcccaggtggcggataaggacgtatcggtgctgatcaccggcgagtccggc
accggcaaggaagtagtggcccgcaacctgcactacaattccccccgacgcgacaagcct
ttcgtacccgtgaactgtggtgccattccggcggagttactggagagtgagctgtttggt
catgagaagggggctttcaccggcgccatcaatgcccgcgcggggcgctttgaactggct
gagggcggcaccctgtttctggatgaaatcggggatatgcccctgaacatgcaggtcaag
attcttcgggtgctgcaggagcgctgctttgagcgggtgggcagtaacaagaccaccagt
atcgacgtgcgggtgattgccgccacccaccgcgacctggagaccatgatcagcgaagat
cggttccgcgaggacctgttctatcggctgaatgtcttccccatcgagctgccagctctg
aaagagcgtgcggaagatatcccactgctgatcaatgagctgatctcccgcctggaaagc
gaggagcggggctccatccgtttcaattccgccgctatcctgtctctgtgccgtcacccc
tggagcggcaacgtgcgcgagctggcaaacctggtggagcgcatggcaatcatgcacccc
tacggtgtggtgggcgttcaggacctgcctcccaaataccgacatgtggatgtggtggaa
gaggattttggtaccgactccgagcaggaggcactgaacggtcaggccggctatgtcagc
atgaacgacacgcctttattgccggagcaggggatcgacctgcgtgaatatatcaacaac
atggagcgggagttgattcagcaggccttgaacgattgtggtggcgtggtggcccgggcg
gcggaccggttgagcgttcggcgcacgaccctggttgagaagatgcggaagtatgatttg
cagcgttga
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