Marinimicrobium sp. C6131: OOT55_04520
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Entry
OOT55_04520 CDS
T08615
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke00521
Streptomycin biosynthesis
mke00523
Polyketide sugar unit biosynthesis
mke00525
Acarbose and validamycin biosynthesis
mke00541
Biosynthesis of various nucleotide sugars
mke01100
Metabolic pathways
mke01110
Biosynthesis of secondary metabolites
mke01250
Biosynthesis of nucleotide sugars
Module
mke_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
OOT55_04520 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OOT55_04520 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
OOT55_04520 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OOT55_04520 (rfbB)
00525 Acarbose and validamycin biosynthesis
OOT55_04520 (rfbB)
Enzymes [BR:
mke01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
OOT55_04520 (rfbB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
adh_short
NAD_binding_10
KR
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
UZJ45325
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All DBs
Position
1075885..1076952
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AA seq
355 aa
AA seq
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MSKTILVTGGAGFIGSAVVRELINNSEHTVINLDKLTYAGNLDSLTSVADNPRYQFVQAD
ITNAEQMDRILADTQPDIIMHLAAESHVDRSIDGPADFIQTNIVGTYTLLEAARKYWSSL
KASDAAKAEGFRFHHISTDEVYGDLEGTDDLFTETTSYAPSSPYSASKASSDHLVRAWGR
TFGLPVVITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGDGQQIRDWLYVEDHARAL
ILVAQKGELGETYNIGGHNEKANLEVVQTICDLLQELVPQDANYRDLITFVTDRPGHDHR
YAIDASKIQKELGWTPEETFETGLRKTVQWYLDNKPWWQKVQDGTYRGERLGVGA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaccatactggtcaccggcggcgccggctttattggctccgccgtggtacgc
gagctgatcaataacagcgagcacacggtcatcaacctggacaagctcacctacgccggt
aatctggactcgctgaccagcgtggccgacaacccacgctaccagtttgtgcaggcggac
atcaccaatgccgaacagatggaccgcatactggcggacacacagccggacatcattatg
cacctggccgccgaaagccatgtagaccgctccatcgacggcccggcggactttatccag
accaacatcgtcggcacttacacgctgctggaagcggcccgtaaatactggagcagcctg
aaagcgagcgatgccgccaaggcggaaggcttccgcttccatcatatctccaccgacgaa
gtctatggcgacctggaaggtacggacgacctgtttaccgaaaccacttcctacgccccc
agcagcccctacagtgccagcaaggccagctcggaccacctcgtccgcgcctggggccgc
accttcggcctgccggtggtcatcaccaactgcagcaacaattacgggccataccatttc
ccggaaaagctcatcccgctgatgattctcaacgctctggcgggcaagccgctgccggtg
tacggcgacgggcagcagatccgggactggctctacgtggaagaccacgcgcgggccctg
attctggttgcccagaagggtgagctgggagaaacctacaacatcggcggccacaacgaa
aaagccaacctggaagtcgtgcagaccatctgcgacctgctccaggagctggtaccgcag
gacgccaactaccgggacctgatcaccttcgttaccgaccgcccgggtcacgaccaccgc
tacgccattgacgccagcaaaatccagaaagaactgggctggacaccggaagaaaccttc
gaaaccggcctgcgcaaaaccgtccaatggtacctggacaacaaaccttggtggcaaaaa
gtccaagacggcacctaccgcggcgaacgcctcggagtaggtgcctag
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