Marinimicrobium sp. C6131: OOT55_04840
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Entry
OOT55_04840 CDS
T08615
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mke
Marinimicrobium sp. C6131
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_04840 (phrB)
Enzymes [BR:
mke01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OOT55_04840 (phrB)
DNA repair and recombination proteins [BR:
mke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OOT55_04840 (phrB)
Prokaryotic type
OOT55_04840 (phrB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZJ45384
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All DBs
Position
1144140..1145585
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AA seq
481 aa
AA seq
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MAAADSQRILVWLRNDLRLRDNPALYHAAEAGQGVVAVYVLCENFIERHSTAPARLDFVR
RHLVQLQADLAERNIPLVLLRVRRADDIPHQLLTLARREGCHSLYFNAEYPLDELDRDRD
VAEHFRRHDRHYKRFHDRVILPPGQVRNGQGEPYQVFTAFKRRWLQLARELPMVPHGLPA
VQPDTLGQVGDAGVPLEALFQGIHLKDLSALWPAGEEEALRRLAEFADGPIHDYKNRRDL
PAEAGTSTLSPYLAVGSLSPRQCLNAALTANEGRWDEGSDGVTTWISELVWRDFYQHVTV
DFPQVCKNRPLQSHTDGFPWRSDEDDLNRWRRGETGIPIVDAAMRQLLETGWMHNRLRMI
VAMFLTKNLRIDWRQGERWFMSQLIDGDFAANNGGWQWSASTGTDAAPYFRIFNPVTQSE
RFDPDGRFIRKYIPELAKVSSRQIHQPPPVSGYPAPMVDLKASRKETIALFQQLNGSPSK
G
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggatagtcagcgtattctcgtgtggctgcgcaatgacctgcggctgcgt
gacaacccggcactgtatcacgcggccgaggccgggcagggtgtggtggcggtgtacgtg
ctgtgtgagaatttcatcgagcggcacagtacggcgccggcgcggcttgactttgttcga
cggcacctggtgcaactgcaagccgacctggccgagcggaatattccactggtcctgctc
cgggtccgtcgggccgacgacattccgcaccaactgctgacgctggcgcggagggaaggg
tgccactcactttacttcaacgcggagtatcccctggatgaactggaccgggaccgggac
gtcgccgagcatttccgtcgccatgaccgacactacaagcgattccacgatcgggtgatt
ctgccaccgggccaggtacgcaacggtcagggcgaaccctaccaggtgtttaccgccttc
aaacggcgatggctgcaactggcgcgtgagcttccgatggtgccgcacggtctgcccgcc
gttcagccggacaccctggggcaggtcggcgatgcgggggtgccgctggaggccctgttc
cagggcatccatctgaaagatctgtcggcactctggcccgccggtgaggaggaggcgctg
cgccgcctcgccgagtttgcggacgggcccattcatgactataaaaacagacgggatctg
ccggcggaggccggcacgtccacgttgtcgccctatctggcagtcggcagcctgtctccg
cgtcagtgtctgaacgccgcactgacggccaacgaaggccgctgggacgagggcagtgat
ggcgtgacgacctggatcagcgaattggtctggcgggatttttatcagcatgtgaccgtg
gactttccgcaggtgtgcaagaaccgtccactgcagagccataccgatggcttcccctgg
cgcagtgatgaggacgacctgaaccgctggcgtcggggagaaacgggtattcccattgtc
gatgcggcgatgcgccagcttctggaaaccggctggatgcacaaccgtctgcggatgatc
gtggccatgttcctgaccaaaaacctgcgcattgactggcgccagggcgagcgctggttc
atgtcccagttgattgacggtgactttgcggccaacaacggcggctggcagtggagtgcc
tccaccggaaccgatgcagcgccttactttcggattttcaatccggtgacccagtccgag
cgttttgatcccgacggacggtttattcgtaagtacattccagagctggcaaaggtttcg
agccgacagattcaccagccgccaccggtgtccggttacccggcaccgatggtggacctg
aaagccagccgcaaggagaccattgcgttgttccagcagctcaatggctcaccgtcaaag
ggctag
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