Marinimicrobium sp. C6131: OOT55_05045
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Entry
OOT55_05045 CDS
T08615
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
OOT55_05045
09124 Replication and repair
03420 Nucleotide excision repair
OOT55_05045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mke03021
]
OOT55_05045
03036 Chromosome and associated proteins [BR:
mke03036
]
OOT55_05045
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_05045
Enzymes [BR:
mke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
OOT55_05045
Transcription machinery [BR:
mke03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
OOT55_05045
Chromosome and associated proteins [BR:
mke03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
OOT55_05045
DNA repair and recombination proteins [BR:
mke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
OOT55_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-ProteinID:
UZJ45422
LinkDB
All DBs
Position
1191813..1194095
Genome browser
AA seq
760 aa
AA seq
DB search
MTDTSYTVSVRALCEFTAKRGSLDMRFTPSPSAREGVEGHLWVTRRRPDHYRAEVPLKGH
YNNLTVRGRADGYDPEQGRLEEIKTFRGSLDLIPDNHRALHWAQAKVYGALLCEMEGLES
IELALVYFDIVRQEEHHLTEHWSADKLKAEFEIQCEAFILWAEQELAHRERRNLAAMELQ
FPYVEFRSGQRPLAEAVYQSAATGRCLLAEAPTGTGKTLGTLFPLIKALATQSLDKVFFL
TAKTPGRQLALDALQTLDLPELRTLELVAREKSCEHPDKACHGDSCPLAKGFYDRLPEAR
QAAARERCLNQARLREIALAHELCPYYLSQEMARWSDVIIGDYNYYFDQSAMLFALTQTH
QWRTALLVDEAHNLIERARGMYSAELDQQRFRRTKKQAPKALKSRLESLNRSWNEFNQSL
PEGRDTILQSEPPEALIGQLQLTAAAITDYLAEHPFALDSELMQFYFDALQFLRIAELFD
ERDFLCDIEWRRPPQGNVRRGARRGTVINPRNLIPAAQLKPRFEGSHSATLFSATLNPAR
YYCDLLGLPDNSVAMAMPSPFSADQLTVHTHRQLSTRYHDRAQSIAPIADLIAEQYHRQT
GNYLAFFSSYDYLQQVHEHLDVHYPDVPTWAQERKMNEAARAAFLAAFQEHSSGVGFAVL
GGAFGEGIDLPGKRLIGAFVATLGLPQMNPTNNALKQRLEEQFGQGYDYAYLYPGLRKVV
QAAGRVIRGEGDTGVIHLIDDRFAQPGIRRLLPDWWALEQ
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacatcctataccgtctccgttcgggctctgtgcgagttcaccgccaagcgc
ggcagcctggacatgcgttttacgccgtcacccagcgcccgggagggcgtggaagggcac
ctgtgggtgacccgtcgccgtccggaccactaccgggcggaagtgcccctcaagggccat
tacaacaacctgaccgtgcggggcagggcggacggctatgatcccgagcaggggcgcctg
gaagaaatcaagacctttcgcgggagcctcgacttgattcccgacaatcatcgggccctg
cactgggcgcaagccaaagtctacggggcgcttttgtgcgaaatggagggacttgaatcg
atcgagttggcgttggtgtatttcgacatcgtccggcaagaggagcaccacctgaccgaa
cactggtcggcggacaagctgaaggccgagttcgaaattcagtgcgaggcctttatcctc
tgggccgaacaggaactcgcgcaccgggagcgacgtaatctggcggcgatggagctccag
tttccgtacgttgagttccgttccggccagcgtccccttgccgaagccgtctatcaatcc
gccgccaccggtcgctgcctgctcgccgaggcgcccacaggcaccggaaaaaccctcggc
actctgtttccgctaatcaaagccctggccacccagtcgctggataaagtgtttttcctc
acggccaaaacccccggtcgccaactggctctggacgctttacagacattggatttgccg
gagctcagaacgctggaactggtggctcgggaaaaaagctgtgaacacccggataaagcc
tgccatggcgattcctgcccactggcaaagggcttttacgatcgtctgcccgaggcgcgt
caagccgccgcgcgggaacgctgcctgaatcaggcgcggttgcgcgagattgcccttgcc
catgagctgtgtccctattatctgagtcaggagatggcccgctggagcgacgtcatcatc
ggtgattacaactactatttcgaccagagtgccatgcttttcgcgctgacccagacccac
caatggcgcaccgcgctgttagtggatgaggctcacaacctgattgaacgcgcccggggc
atgtactcggcggagctggatcaacagcgcttccgacgcaccaaaaagcaggcgccgaaa
gcgctgaaatcccgcctggagtcactcaaccgcagttggaacgagttcaatcaatccttg
ccggaggggcgggacaccattttgcagagtgaaccgccggaagcgctgatcggtcaactg
caactgaccgcggcggcgatcaccgattacctcgccgagcatccctttgccctggacagc
gaactgatgcaattttatttcgacgcgctgcagttcctgagaatcgccgaactgtttgat
gagcgtgattttctgtgcgacatcgaatggcgcaggccgccccaaggaaacgtccgccgc
ggggcgcgccggggaacagtcatcaacccacgcaacctgattcccgccgcccaactcaag
ccccggttcgagggcagccacagcgcgacgctgttttccgcaaccctgaacccggcgcgc
tattactgcgatttgctgggcctgccggacaactccgtggcgatggccatgccgtccccc
ttcagcgcggaccagttgactgttcatactcaccgccaactgtccacccgctaccatgac
cgcgcgcaatccattgcacccatcgccgatcttattgctgagcaatatcaccggcagacg
ggaaattatctcgcgtttttcagcagctacgactatctgcaacaggtgcacgaacacctg
gatgtccattaccccgacgtccccacctgggcacaggaacggaaaatgaacgaagccgct
cgcgccgcgtttctcgccgcttttcaggaacacagcagcggtgtcgggtttgcggtactg
ggcggcgccttcggggaaggtatcgatcttcccggcaaacgactgatcggcgcttttgtc
gcaacactcggactaccccaaatgaatccgaccaacaatgcgcttaagcagcggctggaa
gaacagttcggccagggctacgactacgcctacctgtaccccggcctgcgcaaagtggtg
caggccgcgggccgcgtgatccgcggagagggcgataccggcgtgatacatctgattgac
gaccgcttcgcccaaccgggcattcgccgtctgttacccgactggtgggcattggagcag
tag
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integrated database retrieval system
