Marinimicrobium sp. C6131: OOT55_06790
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Entry
OOT55_06790 CDS
T08615
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mke
Marinimicrobium sp. C6131
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mke03016
]
OOT55_06790
Enzymes [BR:
mke01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
OOT55_06790
Transfer RNA biogenesis [BR:
mke03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OOT55_06790
Prokaryotic type
OOT55_06790
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
UZJ45752
LinkDB
All DBs
Position
complement(1593140..1594141)
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AA seq
333 aa
AA seq
DB search
MTPEFDFRMPTAWGGPRVSAGFRVIPEDFQVDEVLGFEPEGEGEHWLVQVRKRGDNTAWV
AGQLARCAGVPTRDVGYCGLKDRRAVTTQWFSIHQPRGETPDWSALEAAGLTLLRVARHP
RKLRRGQHQANRFVIRLHRVHPDDHDSRNALAQTLQRVSQDGVPNYFGEQRFGRDAGNLH
QAQRWLVEGVRIKNRQQRGMVMSAARAWLFNQVLAERVRESSWREALAGEPSAVPSGPLW
GRGRLLSEQTTAQLESRVLAPWKAWCDGLEHVGLQQERRALVLRPQGLEGAWEGEDLVLS
FALAPGTFATAVLAELARLQTPDVEAASGGSVL
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgacccccgagtttgacttccgaatgcccaccgcctggggcggcccccgagtgtccgcc
gggtttcgggtgataccggaagattttcaggtggatgaagtcctggggtttgagccggag
ggggagggcgagcactggctggtacaggttcgcaaacgcggtgacaataccgcttgggtg
gccgggcaactggcgcgctgtgcgggtgtacccacccgggatgtcggttactgcgggctg
aaagatcggcgtgcggtgaccacccagtggttcagtattcatcagccgcgtggggaaacg
ccggactggtccgcgctggaggcggccggtctcaccctgctgcgggtggctcgccacccg
agaaagctgcggcgcggtcagcatcaggccaatcgctttgtgatccgcctgcaccgggtt
catccggacgaccatgattcccgcaatgctctggcgcagacgctgcagcgcgtgtcgcag
gacggcgttcccaattactttggcgagcagcggtttggtcgcgacgcgggcaacctgcat
caggcgcagcgctggctggtggagggtgtgcgcatcaaaaaccgtcagcaacggggaatg
gtgatgtccgccgcccgcgcctggttgttcaatcaagtgctggcggagcgggtgcgcgag
agctcctggcgggaagcgttggctggcgagccaagcgcggtgccctccggaccactgtgg
ggacgggggcggctgctgagcgagcagacgacggcccaactggaatcccgggtattggca
ccctggaaagcctggtgcgacggactggagcatgtcgggttacagcaggagcggcgcgcc
ctcgtcttgcgcccgcaaggtctggaaggggcctgggaaggggaggaccttgtgctgtcg
ttcgcgctcgcaccgggcacgtttgcgaccgccgtactggccgaactggcccgcctgcag
acaccggacgtagaggcagcgtccgggggctctgtgctatag
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