Marinimicrobium sp. C6131: OOT55_06980
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Entry
OOT55_06980 CDS
T08615
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
OOT55_06980 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mke03019
]
OOT55_06980 (rnc)
03009 Ribosome biogenesis [BR:
mke03009
]
OOT55_06980 (rnc)
03036 Chromosome and associated proteins [BR:
mke03036
]
OOT55_06980 (rnc)
Enzymes [BR:
mke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
OOT55_06980 (rnc)
Messenger RNA biogenesis [BR:
mke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
OOT55_06980 (rnc)
Ribosome biogenesis [BR:
mke03009
]
Eukaryotic type
90S particles
RNase
OOT55_06980 (rnc)
Prokaryotic type
rRNA processing factors
OOT55_06980 (rnc)
Chromosome and associated proteins [BR:
mke03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
OOT55_06980 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
UZJ45787
LinkDB
All DBs
Position
complement(1645196..1645900)
Genome browser
AA seq
234 aa
AA seq
DB search
MSDLLKQRLQARLGYEFRDPAQLDLALTHRSHGARNNERLEFLGDSILNFIIGEALYHQF
PEAREGQLSRLRSQMVKGETLAELAREFELGECLRLGEGEMKSGGHRRESILADTVEALI
GAIYLESGFQVCAERVNAWYQPRLQALSLAQPAKDAKTRLQEFLQAHKLPLPEYDVVEVE
GEAHAHQFTIECRVTPIKETVRAQASSRRVAEKQAAAEMLEKLQNITLKPKRKG
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccttctcaaacaacgcttgcaggctcgcctgggttacgagtttcgtgacccg
gcacagcttgatctggcactgacccatcgcagtcacggtgcccgcaataacgagcgcctg
gaatttctgggcgactcgatcctcaacttcattatcggcgaggcgctctatcaccagttt
cccgaggcaagggaagggcagttgagccgtttgcgctcccagatggtcaaaggggaaacc
ctggccgaactggctcgtgaattcgagcttggcgagtgtctgcgtctgggcgagggtgaa
atgaaaagcggtggccaccgtcgcgagtcgattctcgccgatacggtggaagccctgatc
ggggccatctatctggaatccggttttcaggtctgtgccgaacgggtcaatgcctggtac
cagccccgcctgcaggcgctttcgctggctcagcccgccaaagacgccaagacccgtctg
caggaatttctgcaggcgcacaagctgcccctgcccgagtacgacgtggtcgaggtggaa
ggcgaggcccatgcgcatcagttcacgatcgagtgccgggtgacgcccatcaaggaaacc
gtccgggctcaggccagcagtcggcgggtggccgagaaacaggccgccgccgagatgctg
gaaaaattgcagaacatcaccctcaaaccgaagcgtaagggttag
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