Marinimicrobium sp. C6131: OOT55_07245
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Entry
OOT55_07245 CDS
T08615
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03030
DNA replication
mke03430
Mismatch repair
mke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOT55_07245 (dnaE)
03430 Mismatch repair
OOT55_07245 (dnaE)
03440 Homologous recombination
OOT55_07245 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mke03032
]
OOT55_07245 (dnaE)
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_07245 (dnaE)
Enzymes [BR:
mke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOT55_07245 (dnaE)
DNA replication proteins [BR:
mke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OOT55_07245 (dnaE)
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OOT55_07245 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UZJ45837
LinkDB
All DBs
Position
complement(1706656..1710156)
Genome browser
AA seq
1166 aa
AA seq
DB search
MTTQFVHLRLHTEYSLSDSLVRIKPLVKRVAELGMPAVAVTDQTNFYGLIKFYKAAQGAG
LKPIAGSDFLVANADPDGKPTLITLLAMNNKGYKNIIELISRAWQKGQQQGIAYVQREWI
SELAEGVIALSGGKFGDIGVALIASRQNQARELLSGWMADFPNRFYLELQRTGRDNDEDY
LHAAVDLAAQAQCPVVATNDVRFLRQDEFEAHEARVCISEGRALDDPRRERRYSDQQYLR
SPEEMAELFSDIPEALENSVEIAKRCNLDIELGKYYLPEYPIPDGMTENEFFAKISYEGL
YKRLERILDPQAADYEERKKAYETRLQFELDIIIQMGFPGYFLIVMDFIQWAKDHDIPVG
PGRGSGAGSLVAYSLQITDLDPLQYDLLFERFLNPERVSMPDFDVDFCMDNRDQVIAYVA
DNYGRDAVSQIITFGTMAAKAVVRDVARVQGKSYGLADKLSKMIPATPGMTLEAALEQEE
VLREFLETDEEAQEIWDMAKQLEGLARNVGKHAGGVVIAPTKLTDFAPLYCDETGGGLVT
QYDKNDVEDAGLVKFDFLGLRTLTIIDWAKAMIDQQRAKAGEEPLDIAAIPLDDKPTFDM
LKRAETTAVFQLESRGMKDLIKRMVPESLEELIALVALFRPGPLDSGMVDDFINRKHGRA
KVAYPDAQYQHERLEPILKPTYGVIVYQEQVMQIAQELAGYSLGGADLLRRAMGKKKPEE
MAKQREVFAQGAKEQGIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTAWLKAHYP
AHFMAATMSSDMDKTDKVVTFIEECRQMKLQLLPPDVNTGEFQFSVDDDNNIIYGLGAIK
GLGEGPVESIIAARKDGPFKDLFDFCARVDPRKVNKRALEALIRSGAADKLGPGVDIDYD
RAVMFAAINEAVKTAEQKAANQSAGMVDLFGDVIPGGDPEGDAYGEFHKVRSWSMKERLH
GEKETLGLYLTGHPIDEYDSELNHLVSSRIIDLKPQKESQTVAGLVVAMRVMKTKRGDNM
GFVTLDDRTGRIEVAVFSDAFNEYRDLLLKDSLLVITGQVSHDDYSGSLKMRADQLRLLS
DMRQERARELCLAVEAGALSANFSRQLSELLDPYREGRCPIVIDYTRQGARGQVRLGQAW
QVRPEDDLLQRLRDTYGPESVHLVYS
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgaccacacaattcgtccatctcagattacacaccgaatactccctctcggacagtctg
gtgcgcatcaaacccctggtcaaacgcgtggccgagctgggcatgccggcggtggcggtg
accgaccagaccaacttctacggcctgatcaaattctataaagccgcccagggcgccggg
ctcaaacccatcgccggtagcgacttcctggtggccaacgccgatcccgacggcaaaccg
acgctgataaccctgttggccatgaacaacaaagggtacaaaaacatcatcgaactcatt
tcccgcgcctggcaaaaaggccagcaacagggcatcgcctatgttcagcgcgagtggatc
agcgagttggccgagggcgtcatcgcgctctccgggggtaagtttggtgacatcggcgtg
gcgctcattgccagccggcaaaatcaggccagagaactgctcagtggctggatggcggac
tttcccaaccggttttatctcgagctgcaacgcaccggtcgggacaacgatgaagactat
ttgcacgcggcggtagacctcgcggcacaggcgcagtgtccggtggtggcgaccaacgat
gtccggtttcttcggcaggacgagtttgaggcgcatgaggcgcgagtctgcatcagcgag
ggcagggcgctggacgatccccggcgcgagcgccgctacagcgatcaacaatacctgcgc
tcgcccgaggaaatggcggagctgttcagcgatatccccgaagcgctggaaaactcggtt
gaaatcgccaagcgttgtaatctggatattgaactcggcaaatactacttgccggagtat
cccattcccgacgggatgaccgaaaacgaattttttgccaaaatttcctacgaaggttta
tacaaacgcctggagcgcattctcgatccgcaggcagcggattatgaggagcgtaaaaag
gcctacgaaacccggttgcagttcgagctggatatcatcatccagatggggtttcccggt
tacttcctgatcgtaatggacttcatccagtgggccaaggaccacgatattccggtcggt
cccggtcggggttccggtgccggttcgctggtggcttactcgctgcagattaccgacctg
gacccactccagtatgacctgctgttcgaacgcttcctgaacccggagcgggtctccatg
cccgacttcgacgtcgacttctgcatggacaaccgcgaccaggtgatcgcctacgtggcc
gacaactatggccgggatgcggtcagtcagatcattaccttcggtaccatggctgccaag
gcggtggtgcgtgatgtcgcccgggtgcagggtaagtcctacggtctggcggacaagctc
tctaaaatgattccggccacgccggggatgaccctggaagcggcgctggaacaggaagag
gtactgcgcgaatttcttgagaccgacgaggaagcccaggaaatctgggacatggccaaa
cagctcgaggggttggcgagaaacgtcggtaagcacgccggtggggtagtgattgccccg
accaaattgaccgattttgccccgctgtactgcgatgagaccggcggtggtctggtcacc
cagtacgacaagaacgacgtggaagacgccggtctggtgaagtttgacttcctcgggctg
cgcaccctgacgatcatcgactgggccaaggcgatgatcgatcaacagcgcgccaaggcg
ggggaggaacccctggatatcgccgcgattcccctcgacgacaaaccgacgttcgacatg
ctcaagcgggcggaaaccaccgccgtattccagctcgaatcccggggtatgaaagacctg
atcaagcgcatggtgccggaaagcctggaagagctgatcgccctggtggccctgttccgc
cccggcccgctggactcgggcatggtggacgacttcatcaaccgtaagcacggccgcgcg
aaagtggcctacccggatgcgcagtatcaacacgagcgcctggaaccgattctgaagccg
acctacggcgtgatcgtgtatcaggaacaggtgatgcagatcgcccaggagttggcgggc
tacagtctcggtggcgccgacctgctgcgccgggccatgggtaagaaaaagcccgaggaa
atggccaagcagcgggaggtgttcgcccagggggcgaaagagcaggggattgaccccgac
ctggcaatgaaaattttcgacctggtggaaaagttcgccggctacggtttcaacaaatcc
cactccgccgcgtacgcgctggtgtcctatcagacagcctggttgaaagcgcactacccc
gcgcactttatggcggccaccatgtcttcggacatggacaagaccgacaaagtggtgacc
ttcatcgaagaatgccgtcagatgaagctgcaactgttgccgccggatgtgaacaccggt
gaattccagttcagcgtggatgacgacaacaacatcatctacggcctcggcgccatcaag
gggctgggtgaaggaccagtggaaagcatcatcgccgcgcgcaaggatgggcccttcaag
gacctgtttgacttctgcgcccgcgtcgatccgcgcaaggtgaacaagcgggccctggaa
gccctgatccgttccggtgccgccgacaagctgggcccgggcgtggatattgattacgac
cgcgcggtcatgttcgcggcgatcaacgaggcggtcaaaaccgccgagcagaaagcggcc
aaccagagtgccggtatggtggatctgtttggcgatgtgattcccggcggcgatccggag
ggcgatgcctacggcgagttccacaaagtccgcagctggagcatgaaggagcgtctgcac
ggcgagaaggaaacgctcggcctgtacctcaccggccacccgatcgatgaatacgacagt
gaactgaaccacctggtcagctcgcgcatcatcgatctgaagccccagaaagagtcccag
accgtggccgggctggtggtggccatgcgggtcatgaagaccaagcgcggcgacaatatg
ggctttgtcaccctcgatgaccgcaccggccgtatcgaggtggcggtgttcagtgatgcg
ttcaacgagtatcgggatctactgctgaaagacagcctgctggtcatcacggggcaggtg
agtcacgacgattacagcggttcgctgaagatgcgtgccgatcagttgcggctgttgtcc
gatatgcgtcaggaacgggcccgggagctgtgtctggcggtggaagcgggggctctgtcg
gccaacttctcccggcagttgagtgagctgctggatccttaccgggaggggcgttgcccg
atcgtgattgactacacgcgccagggcgctcgggggcaggtgcgtctggggcaggcctgg
caggtccgccccgaggatgacctgctccaacgcctgcgcgacacctacggcccggaaagc
gttcacctggtctattcgtag
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