Marinimicrobium sp. C6131: OOT55_09965
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Entry
OOT55_09965 CDS
T08615
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mke
Marinimicrobium sp. C6131
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mke03016
]
OOT55_09965 (truB)
Enzymes [BR:
mke01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OOT55_09965 (truB)
Transfer RNA biogenesis [BR:
mke03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OOT55_09965 (truB)
Prokaryotic type
OOT55_09965 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
DUF5817_CT
DUF2406
Motif
Other DBs
NCBI-ProteinID:
UZJ42976
LinkDB
All DBs
Position
complement(2309366..2310331)
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AA seq
321 aa
AA seq
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MARRRKGRPIDGVLLLNKTAGMSSNHALQRAKRLFFAAKAGHTGSLDPLATGLLPLCFGE
ATKFSQFLLDAEKGYRSTFRLGVVTSTGDAEGEVLHEADASGVTREQVERALERFVGDIE
QVPPMFSALKLNGQPLYKLAREGKEVERKPRPVTIHRIDLLDFRPGPQAEIDVEVLCTKG
TYIRTLAEDVGQALDCGARVERLHRTRSGPFDVANAVSLEALEAERGEGMAEVLDHHLLP
ADTPVAALPALVLPADSAYYFRQGNPVMDPQVYRLGDEGDMVRVFGESSAGSEEPRFLGL
GELDDEGRVAPKRLVAASVPQ
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcgcaagggccgtccgattgacggcgtgctgctgttgaacaaaaccgcc
ggaatgtcctccaatcatgcattgcagcgggccaagcggctgtttttcgccgccaaggcg
ggccacaccggcagtcttgaccctctggccaccgggctgttgccgttgtgtttcggtgag
gccaccaagttttcccagtttctgctggatgcggagaaaggctaccgcagcacctttcgc
ctgggtgtggtcaccagcaccggtgatgccgagggcgaagtgctgcacgaggccgacgcc
tcgggagtcacccgggagcaggtggagcgggcactggagcggtttgtcggggacattgag
caggttccgcccatgttctcggcgctcaagctcaacggccaaccgctgtacaaactggcc
cgggaaggcaaggaagtcgagcgcaagccccggccggtgacgatccaccggatcgacctg
ctggactttcggccgggcccccaggcggagattgacgtcgaagtcctctgcaccaagggc
acttatattcgcaccctcgcggaggatgtggggcaggcgctggattgcggcgcccgggtg
gagcgactgcaccgtacccgtagcggcccctttgatgtggccaatgccgtcagcctcgag
gcgctggaggcggagcggggcgagggtatggccgaggtgctggaccaccatctgctgccg
gcggataccccggtcgctgccctgccggcgctggtattgcccgccgacagcgcctactac
ttccgccagggcaacccggtgatggacccccaggtctaccgtctgggcgatgaaggtgat
atggtgcgggtcttcggtgaaagctccgccggctcggaagaaccccggtttctgggcctt
ggtgagctggacgatgaagggcgggtggcgcccaagcggctggtggccgccagcgtgccc
cagtga
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