Marinimicrobium sp. C6131: OOT55_12970
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Entry
OOT55_12970 CDS
T08615
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
OOT55_12970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_12970
Enzymes [BR:
mke01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
OOT55_12970
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
OOT55_12970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
UZJ43562
LinkDB
All DBs
Position
3015221..3015994
Genome browser
AA seq
257 aa
AA seq
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MRVISLSVDGIFQAAQRGLFDWLDSQDADVICLQDLRALEYELEDKPVFQLDGYFSYFFD
SGTPHYNGVAIYTRKQPKALIFGLGFSSGVDMEGRYLQIDYEQLSIGSMLAPSATSEMES
QEVKIKFFDDLQAHLDKITRKRREFIFCGNWAMAHTPRDVTNPEKNEHESGFLPHERQWL
SQVFNQIGYVDAFRKANKDPDEYSWWPSGKIEEGEGWRTDMQIVSAPIGQRVEHAAIYKI
QQFSSHLPVIVDYDIEL
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgagagttatcagtcttagcgtcgatggtattttccaggcggctcagcgcggtctgttt
gactggctggacagccaggatgcagacgtcatctgtctgcaggatctgcgcgcactggaa
tatgaactggaagacaagccggtatttcaactggacggttatttcagctacttcttcgac
tccgggacaccgcactacaacggcgtggccatctacacccgcaagcagcccaaggccctg
atttttggcctggggttctcgtccggcgtggatatggaaggtcgttacctgcagattgac
tacgaacagctaagcattggctcaatgctggcgcccagtgctacctcggaaatggaatcc
caggaagtgaagatcaagtttttcgacgacctacaggcccatctggacaagattacccgc
aagcgccgcgagttcatcttctgcggcaactgggccatggcgcacaccccccgggatgtg
accaacccggagaaaaatgagcacgaatccggctttctgccccacgagcggcagtggctt
agccaggtgttcaaccagatcggctatgtggacgcctttcgcaaggccaacaaggacccg
gacgaatacagctggtggcccagcggcaagattgaggaaggcgaggggtggcgcaccgat
atgcagatcgtgtcagcgcccatcggccagcgggttgagcatgcggccatctataaaatt
cagcagttttccagccacctgccggtgattgtggattacgatatcgagctttga
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