Marinimicrobium sp. C6131: OOT55_13780
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Entry
OOT55_13780 CDS
T08615
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03420
Nucleotide excision repair
mke03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OOT55_13780 (uvrD)
03430 Mismatch repair
OOT55_13780 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_13780 (uvrD)
Enzymes [BR:
mke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
OOT55_13780 (uvrD)
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OOT55_13780 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
OOT55_13780 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UZJ43718
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Position
complement(3214911..3217109)
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AA seq
732 aa
AA seq
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MDVSALLNDLNDAQREAVSAPAHNQLILAGAGSGKTRVLVHRIAWLIQVEQVSPYSIMAV
TFTNKAAREMRARLETLLSDTGQPVNTRSMWVGTFHGLAHRLLKAHWQDAGLPQNFQILD
SDDQLRLIKRVYQRLELDESKWPFRQAQWFINGQKDEGLRPQHIPDSGDPFIRTMLMIYR
AYEEDCQRSGLVDFAELLLRAHELWLHKPHILEHYQRRFPFVLVDEFQDTNSIQYAWLRV
LAGTTAKVTAVGDDDQSIYGWRGARIENIQRFTDDFPGTQTIRLEQNYRSTGTILKAANA
VIANNFGRLGKQLWTEGDDGEPIALYAAFNEQDEARFIVERIEDWVKQGNSYSSSAILYR
SNAQSRVLEEALLREGIAYRIYGGQRFYERLEIKNALAYMRLIANPDDDAGFERVINTPT
RGIGGKTLDAIRECARNQNLSLWQASAQIIANNALPARAANALKGFMQLIDSLADHSTEK
PLDEVAQLVLDETGLLEFHRREKGEKGQAREENLQELVNACRVFDAAEDDELSVLQQFLD
TAALDAGETQADEFEDAVQLMTLHSAKGLEFPLVFLAGVEENLFPHKMSMEDPDRLEEER
RLCYVGITRAMEKLYISYAETRRLYGAETFNALSRFVREIPAELIHEVRLKTTVTRPMGY
GKGDYGRANNVSLTDSGEDTGFHLGQRVSHGVFGEGVILHFEGQGAHARVQVNFDDEGSK
WLVLQYAKLTPM
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccgccctgcttaacgatctgaacgacgcccagcgcgaggccgtctccgct
cccgcccataaccagttgattctggccggtgcgggtagtggcaagacccgggtgctggtg
caccggatcgcctggctgattcaggttgagcaggtctcgccctactccatcatggcggtc
acctttaccaacaaggcggcgcgggaaatgcgcgcgcgcctggaaaccctgctgtctgac
accggccagccggtgaacacccgcagcatgtgggtggggaccttccacggtctggcgcac
cgcttgctcaaggcgcactggcaggatgccggattgccccagaatttccagattctcgat
agcgacgatcagctgcgtctgatcaaacgggtataccagcgcctggaactggatgaatcc
aaatggccgttccgtcaggcccagtggttcatcaatggtcagaaagacgaaggcctgcgt
ccgcagcacatcccggacagcggcgatccgtttatccgcaccatgctgatgatctaccgc
gcctatgaggaggactgccagcgcagtggcttggtggattttgccgagctgttgctgcgt
gcccatgaactctggttgcacaagccccacatcctcgaacactaccaacgccgttttccg
ttcgtcctggtggacgagtttcaggacaccaacagtattcagtacgcctggctgcgggtg
ctcgccgggacgacggccaaggtcaccgccgtgggcgacgatgaccagtccatttacggt
tggcgcggtgcgcggattgaaaatatccagcgctttaccgacgactttccgggtacccag
accatccgcctggaacagaactaccgttccaccggcaccatcctgaaggcggccaatgcg
gtgattgccaacaactttggccgcctgggcaaacagctgtggaccgagggggacgatggc
gagccgatcgcgttgtacgccgcgttcaacgaacaggatgaagcccggtttatcgtcgag
cgcatcgaagattgggtcaagcagggcaacagctactccagctctgccattctgtatcgc
tccaacgcccagtcccgggtgctggaagaagcgctgttgcgcgagggcattgcctatcgc
atctatggcggccagcgattctacgagcgcctggaaatcaaaaacgccctggcctatatg
cggttgattgccaaccccgatgacgatgcgggtttcgagcgggtaatcaatacgcccacc
cggggtattggcggcaaaaccctggatgcgatccgcgagtgcgcccggaatcagaacctg
tccctgtggcaggcctcggcacagatcattgccaacaatgccctgcccgcccgggcggcg
aatgcgctcaaaggctttatgcagctgatcgactcgcttgccgatcacagtacggaaaag
cccctggatgaagtcgcccagttggtgctggacgaaaccgggctgctggagtttcaccgc
agggaaaaaggtgaaaaaggtcaggcccgggaagagaatctgcaggagctggtcaatgcc
tgccgggtgttcgatgccgccgaggacgatgagttgtcggtgttgcagcaatttctggac
accgccgcactggatgccggcgaaacccaggcggatgagtttgaagacgcggttcaattg
atgaccctgcactcggccaagggcctggagtttccgctggtgtttctggccggggtggaa
gagaatctgttcccgcacaaaatgtccatggaggacccggaccgactcgaggaagagcgg
cgcctgtgctatgtgggtatcacccgcgccatggaaaaactctacatcagctacgccgaa
acccgtcgcctgtacggcgcggaaaccttcaacgccctgtcccgcttcgtgcgggaaatt
ccggcggaactgattcacgaagtgcgcctgaaaaccaccgtcacccggcccatgggctat
ggtaagggcgattacggccgggccaataacgtcagcctgaccgattccggtgaagacacc
gggtttcatttgggccaacgggtcagccacggcgtattcggcgaaggtgttatcctgcac
tttgaaggccagggggcccacgcccgggtccaggtcaactttgacgatgaaggcagcaag
tggttggtgctgcaatacgctaaactgacacccatgtag
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