Marinimicrobium sp. C6131: OOT55_14610
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Entry
OOT55_14610 CDS
T08615
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03030
DNA replication
mke03410
Base excision repair
mke03420
Nucleotide excision repair
mke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOT55_14610 (polA)
03410 Base excision repair
OOT55_14610 (polA)
03420 Nucleotide excision repair
OOT55_14610 (polA)
03440 Homologous recombination
OOT55_14610 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mke03032
]
OOT55_14610 (polA)
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_14610 (polA)
Enzymes [BR:
mke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOT55_14610 (polA)
DNA replication proteins [BR:
mke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OOT55_14610 (polA)
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OOT55_14610 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OOT55_14610 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WHD_BrxR
HHH
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZJ43877
LinkDB
All DBs
Position
3412186..3414912
Genome browser
AA seq
908 aa
AA seq
DB search
MTEKAPLVLVDGSSYLYRAYHALPPLNNAKGQPTGAVKGVISMLRRLLKDFPDSPVAVVF
DAKGKTFRDELFAEYKSQRPPMPDDMRPQVQPIKDIVEAMGLPLLVIDGVEADDVIGTLA
RQASEQQRDMIVSTGDKDMAQLVNRHISLVNTMTGSHLDEEGVREKYGFEPPLMIDYLAL
MGDKSDNIPGVPGVGEKTARALIEGLGGLDAIYANLEAVRELGFRGAKTMPEKLEEHRDQ
AYLSRQLATIKTDVELDLRPEDIARGEPDNDKLREIFTELEFRAWITELEPAVEDGAEPT
VSEPDVAVDYEIVTGKKRLDAWLKVLKEAELFAFDTETTSLHAMEAKVVGLSFAVEPGKA
AYVPLAHDYMGAPEQLDRDEVLAALKPLLEDPNKAKVGQNLKYDRNVLRNHEVELRGIAF
DTMLESYVLNSTSGRHDMDSLALRYLDYRCTSFEEIAGKGAKQLTFNQIKIEDAAPYAAE
DADVTLRLHRRLWPELKQIKSLKRVFADLEMPLVPVLANIERNGALVDAKVLGEHSRQLG
ERMAQLEKDAHDIAGRPFNLGSTKQLGEILFDEQKLPVLKKTPKGKPSTAEEVLQELALD
YPLPKLLMEYRGLSKLKSTYTDKLPLMINKATGRIHTSYHQAVTATGRLSSSDPNLQNIP
IRTEEGRRIRQAFVAPKGYKVLAADYSQIELRIMAHLSEDKGLLNAFDKELDVHKATAAE
VFGTELEKVTPEMRRRAKAINFGLIYGMSAFGLAKQLHIGRQEAQEYIDRYFDRYPGVLR
YMDNTRAQAREQGYVETLMGRRLYLPDINARNGNLRQGAERTAINAPMQGTAADIIKAAM
IDVDRWLLKEKLDARIMMQVHDELVLEVAESQLTSVRDGIVERMSKAADLKVPLLVEAGV
GDNWDQAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaaagcccccctggtgttggtggacggttcctcctacctgtaccgtgcctac
catgccctgcctcccctgaataacgccaaaggtcagcccaccggggccgtgaaaggcgtc
atcagtatgttgcgtcggttgctgaaggacttccccgacagcccggttgcagtcgttttt
gacgccaagggcaagaccttccgggacgagctgttcgccgagtacaagtcccagcgcccg
ccgatgcccgatgacatgcgcccccaggtgcagccgatcaaggacattgtggaggccatg
gggttgcccctgttggtcattgacggcgtcgaggccgacgatgtcatcggtaccttggcc
cgtcaggcgagcgagcagcaacgggacatgattgtctccaccggggacaaggacatggcg
cagttggtgaaccgacatatttccctggtcaacactatgaccggctcccatctcgatgag
gaaggggtacgcgagaagtacggcttcgagccgccgctgatgatcgactacctcgccctg
atgggcgacaaatccgacaatattcccggggtgcccggggtgggcgaaaaaaccgcccgg
gccctgatcgaggggttgggcgggctggacgccatttacgccaacctggaagcggtccgg
gagctgggttttcgcggcgccaagaccatgccggagaagctcgaagagcaccgggaccaa
gcctatctgtcccgccagttggcgaccatcaagaccgacgtcgagctggacctgagaccc
gaggatatcgcccggggtgagccggataacgacaagctgcgggagatattcaccgagctg
gaattccgcgcctggataacggagttggagccggcggtggaagatggcgccgagcccacc
gtcagcgaacccgacgtggcggtggattacgagattgtcaccgggaaaaagcgattggac
gcctggctcaaagtgctcaaggaggccgagctgttcgcctttgacaccgagaccaccagc
ctgcacgccatggaggccaaggtggtggggctatcctttgcggtggagcccggcaaggcg
gcctatgtgcctctggcccacgactacatgggcgcgcccgagcagctcgatcgggatgaa
gtgctcgccgcgctcaagcccctgctggaagacccgaacaaagccaaagtggggcagaac
ctcaagtacgatcgcaatgtcctgcgcaatcacgaggttgagctgcgcggtatcgccttc
gataccatgctggaatcctacgtgctcaactccaccagtggccgtcacgatatggacagt
ctggcgctgcgttacctggactaccgctgtacgtcctttgaggagattgccggaaagggt
gccaaacagctcactttcaaccagatcaaaattgaagatgcggcaccttacgccgctgaa
gacgccgacgtgaccttgcgcttgcaccggcggctctggccggaactgaaacagatcaaa
tcactgaagcgagtgtttgctgacctggaaatgcccctggtgccggtgctggccaacatc
gaacgcaacggcgctctggtggatgccaaggttctgggtgagcatagccggcagttgggc
gagcgtatggcgcagcttgaaaaagacgctcacgatatcgccgggcgccccttcaacctg
ggctccaccaaacaactgggtgaaatcctgttcgatgaacagaaattgccggtgctcaag
aaaacccccaagggcaagccgtccaccgccgaagaggtgctgcaggagttggcgctggat
tatccgctgcccaaactgttgatggagtaccgcgggctcagcaagctcaaaagcacctac
accgacaagctgccgttgatgatcaacaaggctacgggacggattcacacctcctaccac
caggcggtgaccgccaccggtcggctgtcttcttcggaccccaacctgcagaacatcccg
attcggaccgaagagggacggcggattcgccaggcgtttgtggcgcccaagggctacaag
gtgctggcggcggattactcccagatcgaactgcgcatcatggcgcacctgtctgaagac
aaaggcctgctcaatgcgttcgacaaggagctggatgtgcacaaggcgaccgctgcggaa
gtgttcggcaccgagctcgaaaaggtgacaccggaaatgcgccgccgggccaaggcgatc
aacttcggcctgatctacggcatgtccgcctttggcctggcgaaacaactgcatatcggc
cgccaggaagcccaggagtacatcgaccgttatttcgaccgctacccgggggtgcttcgc
tatatggacaatacccgtgcccaggcccgagagcagggctacgtggaaaccctgatgggt
cggcggctgtacctgcccgatatcaacgcccgcaatggcaacctgcgccagggggccgag
cgcaccgcgatcaacgcccccatgcaggggaccgcagcggatatcatcaaggcggccatg
atcgatgtcgatcgctggttgctgaaggaaaagctggatgcccggatcatgatgcaggtg
cacgacgaactggtgctggaggtggcggaaagtcagttgacgtcggtgcgggacggcatt
gtcgagcggatgtccaaagcggcggacctgaaagtgcccttgctggtggaagcgggcgtg
ggggataactgggatcaggcgcactaa
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