Marinimicrobium sp. C6131: OOT55_16410
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Entry
OOT55_16410 CDS
T08615
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke03030
DNA replication
mke03430
Mismatch repair
mke03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OOT55_16410
03430 Mismatch repair
OOT55_16410
03440 Homologous recombination
OOT55_16410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mke03032
]
OOT55_16410
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_16410
Enzymes [BR:
mke01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OOT55_16410
DNA replication proteins [BR:
mke03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OOT55_16410
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OOT55_16410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
RNase_H_2
DMA
DNA_pol_A_exo1
CAF1
Motif
Other DBs
NCBI-ProteinID:
UZJ44224
LinkDB
All DBs
Position
complement(3884699..3886180)
Genome browser
AA seq
493 aa
AA seq
DB search
MSDLVSTAQFASRFPGLDRPLAIVDIETTGGSVTRDRITEIGIVEVDENGVREWSTLINP
GMAIPPTIQRFTGITDAMVADAPRFEQVAKAIFQRLERKVFVAHNVRFDYGFLHNAFASL
GFPLSLELLCTVKLSRALYPEHRRHSLEMIIQRFGIETDARHRALADARATYTFLCRAAA
ERSPELFMQAVQAQTRRPSIPPGLDPACLDRLPNGPGVYYFYGENNSLLYVGKSVDVRKR
VMSHFTADRASARGMAMCQQVRDIQVQPTTGELSALLLEAEEIKTRQPLFNRRLRRVSTL
YTLQLHKDAQGVLRPEIMEAPSASRDRRMYGLFPSKKKARNALIDTGKQFGLCDHVIITP
APLNSPCMGRQLKHCKGLCTGDWSAAQHNVSLMDALGSLALKAWPYPGPAALIEYRNPVD
EASPHTLFLLDNWCVLATLKGRGEPDWEQLETLPTKAHLLDKDIYRYLLKVVSKPPREVR
WAPLTQGGQPRNR
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagatctggtatcgaccgcacaatttgcatcccgcttccccggcctggaccgcccc
ctggcgatcgtggacatcgaaaccaccggcggcagtgttacccgcgaccgcatcaccgaa
atcggcattgtcgaggtggatgagaacggtgtccgagagtggagcaccctcatcaacccg
ggcatggccatcccgccgaccattcaacgctttaccgggatcaccgatgcgatggtggcc
gacgcaccgcgctttgagcaggtggcgaaggccatctttcagcgcctggaaagaaaggtg
tttgtggcgcacaacgtccgttttgattacggcttcctgcacaatgcctttgcctcgctg
ggttttccgctctcactggagctgctctgcaccgtcaaactgtcccgggccctgtatccg
gaacaccgacgtcacagcctcgagatgatcatccagcgcttcgggattgaaaccgatgcc
cgtcaccgcgccctggcggatgcccgggcgacctacacgttcctgtgccgagccgcagcc
gagcgctcacccgaattgtttatgcaggccgttcaggctcagacgcgacgacccagtatt
ccaccgggactggaccccgcctgcctggaccgattaccgaacggacccggcgtatattat
ttttacggcgagaacaacagcctgctgtatgtcggcaaaagcgtggatgtacgcaagcgg
gtgatgtcccacttcaccgccgatcgcgcctcggcccgtggtatggcgatgtgtcagcag
gttcgggacattcaggtgcagcccaccacgggggagttgagcgccttattgctggaagcc
gaggaaatcaaaacccggcaaccgctgttcaaccgtcggctgcgcagagtcagcacgctg
tacaccctgcagttgcataaagacgcacagggcgtattgcgaccggagatcatggaggca
ccctccgcctcccgcgatcgtcgtatgtacggtctgttcccgtcgaaaaagaaagcgcgc
aatgcgctgattgataccggaaagcaattcggcttatgcgatcacgtcatcatcacgcct
gcaccgctgaacagcccctgtatgggacgtcaactgaaacactgcaaggggctgtgcacc
ggggactggtcagcggcgcagcacaatgtgagtctgatggacgcgctcggcagcctcgcg
ctgaaggcctggccttaccctggaccagcggcgctgattgaatatcggaatccggtcgat
gaagcatcgccccacacgcttttcctgctggataactggtgtgttctcgcaacgctgaag
gggcgcggcgagccggattgggagcagttggaaaccttacccaccaaggcccacttgttg
gacaaggacatctaccgctacctgctcaaggtggtttcgaaaccacctcgagaggttagg
tgggcaccgcttacacaaggtggtcaaccgcggaatcgataa
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