Marinimicrobium sp. C6131: OOT55_16470
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Entry
OOT55_16470 CDS
T08615
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
mke
Marinimicrobium sp. C6131
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mke03400
]
OOT55_16470
DNA repair and recombination proteins [BR:
mke03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
OOT55_16470
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Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
UZJ44236
LinkDB
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Position
complement(3900456..3900926)
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AA seq
156 aa
AA seq
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MSDVVDHRTRSVMMSGIRGKNTKPELVLRSELHKRGFRFRVHYKQLPGTPDLVFPKYKAI
ILINGCFWHGHDCHLFRWPATRAQFWKIKIESNILRDHKNLNKYRELNWKTLVIWECALK
GKTAIGINQTCEVASRWLQFDHLDAEITGSPLSQPS
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgttgtagatcatcgaacacgctccgttatgatgtcgggcattcgtggcaaa
aacacgaagccagaacttgtcttacgttcagaactccacaagagggggtttcgtttccgg
gttcactataaacagttgcctggtacgccggatctcgttttccccaaatacaaagccatt
attctgattaacggatgcttttggcacggccatgattgtcacctcttcagatggcctgcc
acccgcgctcagttctggaagattaaaattgaatccaacatcctcagggaccataaaaat
ctcaacaaatacagagagttaaactggaaaacccttgtaatttgggagtgtgcactaaag
ggtaaaaccgctattggtattaatcaaacctgcgaagtggctagccgatggctacaattt
gaccacttagatgccgagatcactggcagccccctttctcaaccttcttga
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