Marinimicrobium sp. C6131: OOT55_16830
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Entry
OOT55_16830 CDS
T08615
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K07715
two-component system, NtrC family, response regulator GlrR
Organism
mke
Marinimicrobium sp. C6131
Pathway
mke02020
Two-component system
mke02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mke00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OOT55_16830
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
OOT55_16830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mke02022
]
OOT55_16830
Two-component system [BR:
mke02022
]
NtrC family
GlrK-GlrR (amino sugar metabolism)
OOT55_16830
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_5
MCM
HTH_8
FleQ
AAA
AAA_16
AAA_2
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
UZJ44306
LinkDB
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Position
3995391..3996755
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AA seq
454 aa
AA seq
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MNEARTAAAEQPLILLVDDDPDILQLLSMRLNASGYRVMTASSGEEALASLDREQAAAVV
TDLRMEPMDGMALFTHIQKSWPNVPVIMLTAHGSIREAVEATQQGLFSFLTKPIDNRELR
QVLDQAMELGGLGATPKAGWSDAIVTRSELMFKRLEQARRLARSDINVLIGGESGTGKEL
LAQAVHNASARSEQPFIAVNCGAIPAELLESELFGHVKGAFTGATHNRDGLFLAADGGTL
FLDEIGDMPLNLQVKLLRVLQERKIRPLGSSADQPIDVRIISATHRDLEQAIAEQGFRED
LFYRLNVAQLALPPLRERKEDIPLLARSFLEDIARRTGDTVRQLSPGGQRMLLQFDWPGN
IRQLRNVIEQLVALSPSPLIPEPMIAEVLPEQESPALVPLKEAKRQFERDYVVRILRMTG
GNITEAARLAGRNRSDFHKIMKRHELDSERFRSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcccgaactgcggctgcggagcagccgctgatcttattggtggatgatgat
cccgatattcttcagttgctcagtatgcgactgaatgcctcggggtaccgggtaatgacg
gcgagttcaggggaagaagcattggccagtcttgatcgtgaacaggctgccgccgtggtt
acggacttgcgcatggaaccgatggatggcatggcgttatttactcacattcagaagagt
tggcctaatgtgccggttatcatgctgacggcacacggttcgattcgcgaagccgtggag
gcgactcagcaggggttattctcgtttctgaccaagcccattgataatcgggagctgcga
caagtgctggatcaggcgatggagctgggaggtttgggggcaacgcccaaggccggatgg
tccgatgccatcgtgacccgcagcgagctcatgttcaagcggcttgagcaggcacgccga
ttggcgcgtagcgacatcaatgtgctgattggcggcgagagcggcactggcaaggagctg
ctggcgcaggcggtccacaacgccagcgcccggtcggagcagccttttatcgccgtcaat
tgcggcgccatacccgccgagctgctggagtccgagctgtttggtcacgtcaaaggggca
tttaccggtgcgactcataaccgggatggtctgtttctggccgccgatggtggcaccctg
ttcctggacgaaattggcgatatgccgctcaatctgcaagtcaagctgctgcgggtgctt
caggagcgcaagatccggcctctgggatcatcggcggatcaacccatcgatgtccggatc
atctctgcgacccaccgggacctggagcaggccattgccgagcaaggcttccgggaagat
ctgttctatcgcctgaacgtcgctcaactggcactcccgcctctgcgcgagcgcaaggaa
gatattcccctgttggcccgttcattcctggaagatattgccagacgtaccggcgacacg
gtccgccaattgtcccccggggggcagcggatgttattgcagttcgattggccgggtaat
atccgtcagttgcgcaatgtcatcgagcagctagtggcgctatcgccgtcgcctctgata
ccggagcccatgattgcggaggtactgcccgagcaggaatcaccagcgttggtacccttg
aaggaggccaagcggcagtttgagcgcgactacgtggtccgcattttgcggatgaccggg
ggcaacatcactgaagccgcgcgcctggcagggcggaaccgctcggatttccataaaatc
atgaagcggcacgaactcgatagcgagcgctttcgctcggcttag
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