Mycobacterium kokjensenii: MU0083_000594
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Entry
MU0083_000594 CDS
T10822
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MU0083_000594 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_000594 (recD)
Enzymes [BR:
mkk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MU0083_000594 (recD)
DNA repair and recombination proteins [BR:
mkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MU0083_000594 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
AAA_22
Helicase_RecD
UvrD-helicase
SH3_13
AAA_16
PhoH
nSTAND3
AAA_28
DIMCO_N
Mg_chelatase
MukB
Herpes_Helicase
AAA_5
NTPase_1
UvrD_C
SLFN-g3_helicase
TrwB_AAD_bind
SRP54
T2SSE
NACHT
AAA_29
CbiA
DO-GTPase1
Motif
Other DBs
NCBI-ProteinID:
CAJ1493988
LinkDB
All DBs
Position
1:complement(632335..634083)
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AA seq
582 aa
AA seq
DB search
MSTDVIDPLSCRVAHRATGLLRQFNEAGVLESADVHTAQRLCTLGGESDETVALAVALTV
RALRTGSVCLELATVAAGTELPELPWPEPTAWLATVRASSLVARQVLRFYADRLLYLDRY
WREEEQVCADLLALSTPHAGPAGLAAVERLFPPEYHEQRAAAEIALTQAVTVLTGGPGTG
KTTTVARLLALLADRSEGAGRPRLRIALAAPTGKAAARLTEAVAGEVGRLDPIDQARLAG
LQASTLHTLLGSRPGNSSRFKHNRANRLPHDVIVVDETSMVPLTMMARLLEAVRPTARLI
LVGDPDQLASVEAGAVLADLVEGLAARPGTRVATLSTAHRYKKSIGELAAAIRAGDGDTV
IDLLRSGDEHREWIDVTGPAALAGKLAEIAVPHALRVRQAAVLGDAGEALRNLDEHRLLC
AHRDGQHGANHWNRQVRRWVSDQTGDPLWSEWYAGRPLLVTANDYGLGVRNGDTGVVVAD
DEGLRAVIATASGPVDFATGRLSDVDSMYAMTIHKSQGSEADVVTVLMPPVESRLLTREL
FYTAVTRAKHQVRVVGSEQEIRAALDRRVVRASGLALRLQEA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacgtcatcgatccgctgtcgtgccgggtggcacaccgggccaccggcctg
ctgcggcagttcaacgaggccggggtgctcgagtccgcggatgtgcataccgcacaacgg
ctctgcacgctgggcggcgaatccgacgagacggtggcgctggcggtggcgttgacggta
cgcgcgctgcgcaccggatcggtctgcctggagttggcgacggtggccgccggcaccgag
ctgccggagttgccgtggccggagccgacggcgtggctggcgacggtgcgcgcgagttcc
ctggtggccaggcaggtgctgcgcttctacgcggatcgactgctctacctggaccgttat
tggcgggaggaggagcaggtctgcgccgacctgctggcactgtccaccccgcacgccggg
ccggccgggctggccgcggtggagcggctgttcccgccggagtatcacgaacagcgggcg
gccgccgagatcgcgctgacacaggccgtcacggtgttgaccggtggtccgggcaccggc
aagaccaccacggtggcccgactgctggcgctgctggccgaccggtccgagggggccgga
cgcccgcggctgcggatcgcgctggccgcccccaccggcaaggccgcggcacggctgacc
gaggctgtggccggtgaggtcggcaggctcgacccgatcgatcaggcccggctggccggg
ttgcaggccagcaccctgcacacgctgttgggttcgcggcccgggaattcgtcgcggttc
aagcacaatcgggccaatcggctgccgcacgacgtgatcgtcgtcgacgagacgtcgatg
gtgccgctgaccatgatggcccggctgctggaggcggtccggccgaccgcccggctgatc
ctggtgggtgaccccgaccagttggcgtcggtggaggccggggcggtgctggccgacctg
gtggagggtctggcggcccggcccggtacccgggtggcgacgctgtcgaccgcgcaccgc
tacaagaagtcgatcggcgagttggccgcagccatccgggccggggacggcgacaccgtc
atcgacctgctgcgctccggcgacgaacaccgggagtggatcgacgtgacgggcccggcc
gcactggccgggaagctggccgagatcgcggtgccgcacgcgttgcgggtccggcaggcg
gcggtgctcggtgatgccggcgaggcgctgcgcaatctcgacgagcaccggttgttgtgt
gcgcaccgcgacggccagcacggggcgaatcactggaaccgtcaggtgcgccgctgggtg
tccgatcagaccggggatccgctgtggtcggagtggtatgccggacgtccactgctggtc
accgccaacgattacggactgggtgtgcgcaacggcgacaccggtgtggtggtggccgac
gacgagggcctgcgggcggtgatcgcgaccgcgtcgggcccggtggatttcgccaccggc
cggctctccgacgtcgacagcatgtacgcgatgaccatccacaagagtcagggcagcgaa
gccgacgtggtgacggtgctgatgccgccggtcgagtcgcggttgctgacccgggagctg
ttctacaccgcggtgacccgcgccaagcatcaggtgcgggtggtcggctccgagcaggag
atccgcgccgcactggatcggcgggtggtgcgggcctcggggttggcgttgcgactgcag
gaggcgtga
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