Mycobacterium kokjensenii: MU0083_000633
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Entry
MU0083_000633 CDS
T10822
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MU0083_000633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkk03021
]
MU0083_000633
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_000633
Enzymes [BR:
mkk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MU0083_000633
Transcription machinery [BR:
mkk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MU0083_000633
DNA repair and recombination proteins [BR:
mkk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MU0083_000633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_1
Peptidase_M23
Glyco_tran_WecG
Motif
Other DBs
NCBI-ProteinID:
CAJ1494060
UniProt:
A0ABN9MVK4
LinkDB
All DBs
Position
1:670860..674390
Genome browser
AA seq
1176 aa
AA seq
DB search
MLEGRILAVSRQSKTNQNSPNSSVPGAPNRVSFAKLREPLEVPGLLDVQTDSFQWLIGAP
EWREKMTQQTGAAPKGGLEEVLEELSPIEDFSGSMSLSFSDPRFDDVKAAVEECRDKDMT
YAAPLFVTAEFINNNTGEIKSQTVFMGDFPMMTEKGTFIINGTERVVVSQLVRSPGVYFD
ANIDKSTEKTLHSVKVIPGRGAWLEFDVDKRDLVGVRIDRKRRQPVTILLKALGWTSEQI
RERFGFSEIMMSTLEKDNAASPDEALLDIYRKLRPGEPPTKESAQALLENLFFKEKRYDL
ARVGRYKINKKLGLTANPGESQPTTLTEEDIVATIEYLVRLHQAAQDGVSVTMTVPGGVE
VPVEVDDIDHFGNRRLRTVGELIQNQIRVGLSRMERVVRERMTTQDVEAITPQTLINIRP
VVAAIKEFFGTSQLSQFMDQNNPLSGLTHKRRLSALGPGGLSRERAGLEVRDVHPSHYGR
MCPIETPEGPNIGLIGSLSVYARVNPFGFIETPYRKVNDGVVSDDIEYLTADEEDRHIVA
QANSPLEADGRFTEERVLVRRKGGEVEYVSSSEVDYMDVSPRQMVSVATAMIPFLEHDDA
NRALMGANMQRQAVPLVRSEAPLVGTGMELRAAIDAGDVIVADKTGVIEEVSADYVTVMA
DDGTRQTYRMRKFNRSNHGTCANQRPIVDAGQRVEAGQVIADGPCTDNGEMALGKNLLVA
IMPWEGHNYEDAIILSNRLVEEDVLTSIHIEEHEIDARDTKLGAEEITRDIPNVSDEVLA
DLDERGIVRIGAEVRDGDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHG
ESGKVIGIRVFSREDDDELPAGVNELVRVYVAQKRKISDGDKLAGRHGNKGVIGKILPVE
DMPFLPDGTPVDIILNTHGVPRRMNIGQILETHLGWIAKTGWNIDVAAGVPDWAEKLPEE
LYSAGPDTRTATPVFDGAQEEELQGLLSSTLANRDGEVMVNGDGKAMLFDGRSGEPFPYP
VTVGYMYILKLHHLVDDKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMECWAMQAYGAA
YTLQELLTIKSDDTVGRVKVYEAIVKGENIPEPGIPESFKVLLKELQSLCLNVEVLAKDG
AAIELREGEDEDLERAAANLGINLSRNESASVEDLA
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
gtgctggaaggacgcatcttggcagtctcccgccagagcaagacgaaccagaattctccc
aatagttccgtccccggggccccgaaccgggtctccttcgccaagctgcgtgaacccctc
gaggttccgggtctgctcgacgtgcagaccgactcgttccagtggctgatcggggcgccg
gaatggcgcgagaagatgacgcagcagaccggtgccgcgcccaagggtggtctcgaggag
gtgctcgaggagctctccccgatcgaggacttctccggctcgatgtcgctgtcgttctcc
gacccccggttcgacgacgtcaaggccgcggtggaggaatgccgcgacaaggacatgacg
tatgcggcgccgctgttcgtcaccgcggaattcatcaacaacaacaccggcgagatcaag
agccagacggtgttcatgggtgacttcccgatgatgaccgagaagggcaccttcatcatc
aacggcaccgagcgtgtcgtcgtctcccagctggtgcgttcgccgggcgtgtacttcgac
gccaacatcgacaagtcgaccgagaagacgctgcactcggtcaaggtgatccccggccgc
ggtgcctggctggagttcgacgtcgacaagcgcgacctggtcggcgtccggatcgaccgt
aagcgccgccagccggtcaccatcctgctcaaggcgctgggctggacctccgagcagatc
cgcgagcggttcggcttctccgagatcatgatgtcgacgctggagaaggacaacgccgcc
agccccgacgaagcgctgctggacatctaccgcaagctgcgtccgggcgagccccccacc
aaggagtccgcgcaggcactgctggagaacctgttcttcaaggagaagcgctacgacctg
gcgcgggtcggccgctacaagatcaacaagaagctgggcctgaccgccaacccgggtgag
tcgcagccgaccacgctgaccgaagaggacatcgtggccaccatcgagtacctggtgcgt
ctgcaccaggccgctcaggacggcgtctcggtcaccatgacggtgcccggcggcgtcgag
gttcccgtcgaggtcgacgacatcgaccacttcggtaaccgccggctgcgtaccgtcggc
gagctgatccagaaccagatccgggtcggtctgtcccggatggagcgcgtggtccgcgag
cggatgaccacccaggacgtcgaggccatcacgccgcagaccctgatcaacatccgcccg
gtggtcgccgccatcaaggagttcttcggcaccagccagctctcccagttcatggaccag
aacaacccgctgtcgggtctgacccacaagcgtcgtctgtcggcgctggggcccggtggt
ctgtcccgcgagcgggccggcctggaagtccgtgacgtgcacccgagccactacggccgg
atgtgtccgatcgagaccccggaaggcccgaacatcggtctgatcgggtcgctgtcggtg
tatgcgcgggtcaacccgttcgggttcatcgagacgccgtaccgcaaggtcaacgacggt
gtggtcagcgacgacatcgagtacctgaccgccgacgaggaggaccgccacatcgtggcg
caggccaactcgccgctggaggccgacggccgcttcaccgaggagcgcgtgctggtccgc
cgtaagggcggcgaggtcgagtacgtgtcgtcgtccgaggtcgactacatggacgtctcg
ccgcgccagatggtgtcggtggccacggccatgatcccgttcctcgagcacgacgacgcc
aaccgtgccctgatgggtgccaacatgcagcgtcaggcggttccgctggtgcgcagcgag
gcgccgctggtgggtaccggcatggaactgcgtgccgcgatcgacgccggcgacgtgatc
gtcgccgacaagaccggtgtcatcgaagaggtgtccgccgactacgtcacggtgatggcc
gacgacggcacccggcagacctaccggatgcgcaagttcaaccggtccaaccacggcacc
tgcgccaaccagcgtccgatcgtcgacgccgggcagcgtgtcgaggccggccaggtgatc
gccgacggtccgtgcaccgacaacggtgagatggccctgggcaagaacctgctcgtggcg
atcatgccgtgggagggtcacaactacgaggacgcgatcatcctgtccaacaggctggtc
gaggaggacgtgctgacctcgatccacatcgaggagcacgagatcgacgcccgcgacacc
aagctgggcgccgaggagatcacccgggacatcccgaacgtctcggacgaagtcctcgcc
gatcttgatgagcgcggcatcgtccgcatcggcgccgaggtccgcgacggtgacatcctg
gtcggcaaggtgacccccaagggtgagaccgagctgacccccgaggagcggctgctgcgg
gcgatcttcggtgagaaggcccgcgaggtccgcgacacctcgctgaaggtgccgcacggc
gagtccggcaaggtcatcggcatccgggtgttctcccgcgaagacgacgacgagctgccc
gccggggtcaacgagctggtgcgcgtctacgtcgcgcagaagcgcaagatctccgacggt
gacaagctggccggccggcacggcaacaagggtgttatcggcaagatcctgccggtcgag
gacatgccgttcctgccggacggcaccccggtcgacatcatcttgaacacccacggtgtg
ccgcgtcgtatgaacatcggtcagatcctggagacccacctgggctggatcgccaagacc
ggctggaacatcgatgtggcggccggcgtgccggactgggccgagaagctccccgaggag
ctgtactcggccggcccggacacccgcaccgcgaccccggtgttcgacggcgcgcaggaa
gaggagctgcaggggctgctgtcctcgacgctggccaaccgcgacggcgaggtcatggtc
aacggcgacggcaaggcgatgctgttcgacggtcgctccggtgagccgttcccgtacccg
gtgaccgtcggctacatgtacatcctgaagctgcaccacttggtggacgacaagatccac
gcccgctccaccggcccgtactcgatgatcacccagcagccgctcggtggtaaggcgcag
ttcggtggccagcgcttcggtgagatggagtgctgggctatgcaggcctacggtgcggcg
tacacgctgcaggagctgttgacgatcaaatccgacgacaccgtcgggcgcgtcaaggtc
tacgaggccatcgtcaagggcgagaacatccccgagccgggtattcccgagtcgttcaag
gtgttgctcaaggagctccagtcgctctgcctcaacgtcgaggtgctggcgaaggacggt
gcggcgatcgagctgcgcgaaggtgaggacgaggacctggagcgggctgccgcgaacctg
ggaatcaacctgtcccgcaacgaatccgcttcggtcgaggatctcgcgtag
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