Mycobacterium kokjensenii: MU0083_000735
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Entry
MU0083_000735 CDS
T10822
Name
(GenBank) DEAD/DEAH box helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MU0083_000735
09124 Replication and repair
03420 Nucleotide excision repair
MU0083_000735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mkk03021
]
MU0083_000735
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_000735
Enzymes [BR:
mkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MU0083_000735
Transcription machinery [BR:
mkk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
MU0083_000735
DNA repair and recombination proteins [BR:
mkk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
MU0083_000735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
DUF7108
Motif
Other DBs
NCBI-ProteinID:
CAJ1494255
UniProt:
A0ABM9L7Z1
LinkDB
All DBs
Position
1:complement(773165..774817)
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AA seq
550 aa
AA seq
DB search
MSTDGPLIVQSDKTLLLEVDHEQAGAARAAIAPFAELERAPEHVHTYRVTPLALWNARAA
GHDAEQVVDALVSYSRYAVPQPLLVDIVDTMARYGRLQLVKHPAHGLTLVSLDRAVLEEV
LRNKKIAPMLGARIDDDTVLVHPSERGRVKQMLLKIGWPAEDLAGYVDGEAHPIELRPDG
WQLRDYQEMAVDSFWSGGSGVVVLPCGAGKTLVGAAAMAKAKATTLILVTNTVSGRQWKR
ELVARTSLTEDEIGEYSGERKEIRPVTIATYQVITRRTKGEYRHLELFDSRDWGLIVYDE
VHLLPAPVFRMTADLQSRRRLGLTATLIREDGREGDVFSLIGPKRYDAPWKDIEAQGWIA
PAECVEVRVTMTESERMTYAVAEPEERYKLCSTVHSKIAVVRSILKQHPGEQTLVIGAYL
DQLDELGEQLNAPVIQGSTRNAEREKLFDAFRRGEISTLVVSKVANFSIDLPEASVAVQV
SGTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVARDSLDAEYAAHRQRFLAEQGYGYIIR
DADDLLGPAI
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagacggcccgttgatcgtccagtccgacaagactctgctgttggaggtcgat
cacgagcaggcgggcgccgcgcgcgcggccatcgcaccgttcgccgaactcgagcgtgct
cccgagcacgtgcacacctaccgcgtcaccccgctggcgttgtggaacgcccgtgccgcc
gggcacgatgccgagcaggtggtcgacgcgctggtcagctactcccggtacgcggtgccg
cagccgctgctggtcgacatcgtcgacaccatggcccgctacgggcgcctgcagctggtc
aagcacccggcgcacggcctgacgctggtcagcctggatcgggcggtgctcgaggaggtg
ctgcgcaacaagaagatcgccccgatgctcggtgcccgcatcgacgacgacaccgtgctc
gtgcaccccagcgagcgcggccgggtcaaacagatgttgctgaagatcggttggcccgca
gaggatctggccggctacgtcgacggcgaggcgcatccgatcgagctgcggcccgacggc
tggcagctgcgcgactatcaggagatggccgtggactcgttctggtcgggcgggtccggg
gtggtggtgctgccctgtggcgcgggcaagacgctggtcggcgccgcggcgatggccaag
gccaaggccaccaccttgatcctggtgaccaacaccgtttcgggccggcagtggaagcgt
gaactggtggcgcgcacctcactgaccgaggacgagatcggcgaatactccggtgagcgc
aaggagatccgaccggtcaccatcgccacctatcaggtgatcactcggcgcaccaagggc
gaataccggcatctggagctcttcgacagccgcgactggggcctgatcgtctacgacgag
gtgcacctgctgcccgcgccggtgttccggatgaccgccgatctgcagtcacgccggcgg
ctggggttgaccgcgacgctgatccgcgaggacggccgcgaaggcgacgtgttcagtctg
atcgggccgaaacgctacgacgcgccgtggaaggacatcgaggcgcagggctggatcgcg
ccggccgaatgcgtcgaggtgcgggtcaccatgaccgagagcgagcggatgacctacgcg
gtcgccgagcccgaggagcgctacaagctgtgctcgacggtgcactccaagatcgcggtg
gtgcgctcgatcctcaaacagcaccccggcgagcaaaccctggtgatcggcgcctatctc
gaccagctcgacgagctcggcgagcagttgaacgccccggtgatccaagggtccacccgc
aacgccgagcgcgagaagctgttcgacgccttccgccgcggtgagatctccacactggtg
gtgtccaaggtcgccaacttctccatcgacctgccggaagcgtcggtggccgtgcaggtt
tcgggcaccttcgggtcccgccaggaggaggcgcagcgactaggccggctgctgcgaccc
aaggccgacggtggtggcgcggtgttctattcggtggtcgcccgcgacagcctggacgcc
gaatacgccgcgcaccggcagcggttcctggccgagcagggctacggctacatcatccgc
gacgccgacgacctgctgggtccggcaatctag
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