Mycobacterium kokjensenii: MU0083_000832
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Entry
MU0083_000832 CDS
T10822
Name
(GenBank) DNA-formamidopyrimidine glycosylase family protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MU0083_000832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_000832
Enzymes [BR:
mkk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MU0083_000832
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MU0083_000832
DNA repair and recombination proteins [BR:
mkk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MU0083_000832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_TFIIB
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
CAJ1494509
LinkDB
All DBs
Position
1:879876..880739
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AA seq
287 aa
AA seq
DB search
MPELPEVEALADHLRRRAVGATIGRIDVAALSVLKTFDPPVAELHGRAVTGAHRWGKYLG
VQAGGLYLIAHLSRAGWLRWSDRLAPAPLRPGKGPIALRVHLGTPGQAPGFDLTEAGTQK
RLAVWLVDDPAKVPGIAGLGPDALAVGADDLVRLFAGNTGRIKNVITDQKVIAGIGNAYS
DEILHTAKISPFATAARLTHVQLVGLHDAMGRVLGDAVDRSVGQQAATLKGEKRSGLRVH
ARAGLPCPVCSDTVREISFADKSFQYCPTCQTGGKVLADRRMSKLLK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgccggagttgcccgaagtcgaagcgctcgccgaccatctgcgtcggcgcgcggtaggc
gccaccatcgggcgtatcgacgttgcggccctgtcggtgctcaagaccttcgacccgccg
gtggcggagttgcacggccgggccgtgacgggtgcgcatcgctggggcaagtatctgggt
gtacaggccggtgggctgtacctgatcgcgcacctgtcgcgggcggggtggttgcgctgg
tcggaccggctggcgccggccccgctgcggccgggtaagggtccgatcgcgctgcgggtg
cacctcggcacacccgggcaggcgccgggcttcgatctgaccgaggccggcacccagaag
cgcttggcggtgtggctggtcgacgatccggcgaaggtgcccggtatcgccggattgggg
cccgacgcgcttgcggtcggcgccgacgatctggtgcggctgtttgccggtaacaccggc
cggatcaagaacgtcatcaccgaccagaaggtgatcgcggggatcggcaacgcctacagt
gacgaaattctgcataccgcaaagatttcccccttcgccaccgccgccaggttgacgcat
gtgcagctggtggggctgcacgacgccatgggcagggttctcggcgacgcggtggaccgg
tcggtgggccagcaagccgccacgttgaagggcgagaagcgttccgggctgcgggtgcat
gcccgcgccggtttgccctgcccggtgtgttcggacaccgttcgcgagatatcgtttgcc
gataagtcatttcagtactgccccacatgtcagaccggcggtaaggtgctggccgaccgg
aggatgtccaagctgctcaagtag
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