Mycobacterium kokjensenii: MU0083_003430
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Entry
MU0083_003430 CDS
T10822
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MU0083_003430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mkk03019
]
MU0083_003430
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_003430
Enzymes [BR:
mkk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MU0083_003430
Messenger RNA biogenesis [BR:
mkk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MU0083_003430
DNA repair and recombination proteins [BR:
mkk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MU0083_003430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
DUF8096
KORA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CAJ1504412
UniProt:
A0ABN9ND54
LinkDB
All DBs
Position
1:complement(3640996..3643071)
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AA seq
691 aa
AA seq
DB search
MRTQAQAILEQLAGPDARLRDDQWAAIEALVVGRRRALVVQRTGWGKSAVYFIAAKLLRA
AGHGPTVIVSPLLALMRNQVAAAERAGVHAATINSANVTEWADVQRRVSAGDLDVLLVSP
ERLNNPDFRDEVLPALAARAGLVVVDEAHCVSDWGHDFRPDYRRIRTLIAELGADVPVLA
TTATANDRVVDDVAGQLGVGGADTLVLRGGLDRESLRLSVIAAGGPAQRTAWVGAHLNEL
PGSGIVYTLTVAQAHDLAADLRAQGFAVAAYTGSTDSADREQLEADLLANRVKALIATSA
LGMGFDKPDLGFVVHLGAPSSPIAYYQQVGRAGRATASAEVILLPGTEDQDIWNYFASLA
FPAESLVRKVIGELSPDQPLSTPALESRVDLNRSRLEMVLKVLDVDGAVRRVKGGWLGTG
VPWIYDEQRYRKLDELRRAEQQAMLDYQRTDDCRMSFLRAQLNDPQLQPGERCGRCDNCA
GPRFDAAVDAAAAEATRERLMRPGVEITPRRQWPSGLARLGLELSGRITDGPEPGRVIGR
FTDLGWGVRLRRLLDEPDQQVPEEVVRAAVRVLADWDWRTRPTAVLGLDSATHPVLIGSL
ADRLAELGRLTRLDDLRYAPGRRATTAANSAYRVAALQGSWLPPAELPAGIGPVLLVDDV
TDTGWTLTMAARVLRAAGAPQVLPFALASVN
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgagaacgcaagcccaggcgatcctggaacagctggccggtcccgacgcccggttgcgc
gacgaccagtgggccgcgatcgaggccctggtggtcgggcgccgccgtgcactggtggtg
caacgcaccggctggggtaaatcggcggtgtacttcatcgccgccaagctgctgcgggcc
gccggtcacgggccgacggtgatcgtctcgccgctgctggcgttgatgcgcaaccaggtc
gccgccgccgaacgcgccggggtgcacgccgccaccatcaactccgccaacgtcaccgag
tgggccgacgtgcagcgccgggtgagcgccggtgacctcgacgtgctgctggtcagcccg
gaacggctcaacaaccccgacttccgcgacgaggtactgccggcgctggcggcccgcgcc
gggctggtggtggtcgacgaagcgcactgcgtctcggactgggggcacgacttccggccg
gactatcggcgcatccgcaccctgatcgccgaattgggtgcggacgtgccggtattggcg
accaccgcgaccgccaacgatcgggtggtcgacgacgtcgccggccaactcggggtcggc
ggcgccgacaccctggtgctgcgcgggggcctggaccgggaatcgttgcggctgtcggtg
atcgccgccgggggtccggcgcaacggaccgcctgggtcggcgcccacctgaacgagctg
cccggttcggggatcgtctacacgctcaccgtggcccaggcccacgacctggcggcagac
ctgcgggcgcaggggttcgcggtcgccgcctacaccgggtccaccgactcggccgaccgg
gaacagctcgaggccgacctgctggccaaccgggtcaaggcgctgatcgccacctcggcg
ctgggcatgggattcgacaagcccgacctcggcttcgtggtgcacctgggtgccccgtct
tcgccgatcgcctactaccagcaggtcggtcgcgccgggcgtgccaccgccagcgccgaa
gtcatcctgctgccgggcaccgaggatcaggacatctggaactacttcgcctccctggcg
tttccggcggaatcgttggtgcgcaaggtgatcggcgagctctcgccggatcagccactg
tcgacgccggcactggagtcccgcgtcgacctgaaccggtcacggctggagatggtgctc
aaggtcctcgacgtcgacggcgcggtgcgccgggtcaaggggggatggctgggcaccggg
gtgccgtggatctacgacgagcagcgctaccgcaagctcgacgaactgcgccgcgccgag
cagcaggcgatgctggactaccagcgcaccgacgactgccggatgagcttcctgcgcgcc
cagctcaacgacccgcagctgcagcccggggagcgttgcgggcgctgcgacaactgcgcc
ggaccgcgattcgacgccgcggtggatgccgccgccgcggaggccacccgcgagcggctg
atgcgcccgggtgtggagatcaccccgcggcggcagtggccgtcggggttggcgcgactc
ggcctcgagctgtccggccggatcaccgacggtcccgagccgggccgggtcatcggaagg
ttcaccgacctgggctggggggtgcggctgcggcgactgctcgacgaaccggatcaacag
gtgcccgaggaggtggtgcgtgccgcggtgcgggtgctggccgactgggattggcgaacc
cggccgaccgcggtgctggggctggattcggcgacgcatccggtgctgatcggttcgctg
gccgaccggctggccgaactcggccggctgacccggctcgacgatctgcggtatgcgccg
gggcggcgggcgacgacggcggcgaactcggcctaccgggtcgcagccctgcagggcagc
tggctgccgcccgccgaactcccggccggcatcgggccggtactgctggtcgacgatgtc
accgacaccgggtggacgctgaccatggcggcccgggtgctgcgtgccgccggcgcaccg
caggtcctgccgttcgccctggccagcgtcaactga
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