Mycobacterium kokjensenii: MU0083_003626
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Entry
MU0083_003626 CDS
T10822
Name
(GenBank) DEDDh family exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mkk Mycobacterium kokjensenii
Pathway
mkk03030
DNA replication
mkk03430
Mismatch repair
mkk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MU0083_003626
03430 Mismatch repair
MU0083_003626
03440 Homologous recombination
MU0083_003626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkk03032
]
MU0083_003626
03400 DNA repair and recombination proteins [BR:
mkk03400
]
MU0083_003626
Enzymes [BR:
mkk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MU0083_003626
DNA replication proteins [BR:
mkk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MU0083_003626
DNA repair and recombination proteins [BR:
mkk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MU0083_003626
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
CAJ1505183
UniProt:
A0ABM9LUZ4
LinkDB
All DBs
Position
1:complement(3869162..3870160)
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AA seq
332 aa
AA seq
DB search
MSARWGRPAREPGDGWVVVDVETSGFRPGQARVLSVAALALDAEGRVEQSVSHLVNPGTD
PGPTHVHGLTAEMLAGQPQFADVVDEITELLAGRTLVAHNVAFDYTFLAAEAEMAGAVLP
VDSVMCTLELARRLDLGLPNLRLQTLAAHWGVVQTRAHDALDDARVLAGVLQPSLQRARE
RDVWLPVRPVTRRCWPNGRITHEELRPLKALASRMPCAYLNPGRYVRGRPLVQGMRVALS
AECTRTHEELVERILHAGLAYSDVVDAHTSLVICNDDRPEQGKGYLAHELGVPTVSDDDF
MARVGGVGGVVPGTGIEDFVDDGAPGDQISLF
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcggtgggggcgcccggcccgtgaacccggcgacggctgggtggtggtcgac
gtcgagacctcgggcttccggcccggccaggcccgggtgctcagcgtcgccgcgctggcg
ctcgacgccgagggccgggtggagcagtcggtgtcacacctggtcaatccgggcaccgac
ccgggccccacgcatgtgcacgggctgaccgcggagatgctggccggccagccgcagttc
gccgacgtcgtcgacgagatcaccgaactgctggccggacgcaccctggtcgcccacaac
gtcgcattcgactacaccttcctggccgccgaagccgagatggccggcgccgtgctgccg
gtggactcggtgatgtgcacgctggagttggcgcgccggctggatctggggctgcccaac
ctgcggttgcagacgctggcggcgcactggggcgtggtgcagacccgggcgcacgacgcg
ctcgacgacgcccgggtgctggccggggtgctgcagccgtccctgcagcgcgcccgggag
cgcgacgtgtggctgccggtgcggccggtgacccggcggtgctggcccaacggccgcatc
acccacgaggaactgcgaccgctcaaggcgctggcctcgcggatgccgtgcgcctacctc
aacccgggccgctatgtgcggggccgcccgctggtgcagggcatgcgggtggcgttgtcg
gccgaatgcacccgtacccacgaggaactcgtcgaacgcatcctgcacgccgggctggcc
tacagcgacgtcgtcgacgcccacacctcactggtgatctgcaacgacgaccggcccgag
cagggcaagggctatctggcgcacgaactcggggtgccgacggtctccgacgacgacttc
atggcgcgggtgggcggggtcggcggcgtcgtcccgggcaccggcatcgaggacttcgtc
gacgacggggctcccggggaccagatctcgctgttctga
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