KEGG   Mycobacterium sp. KMS: Mkms_0032
Entry
Mkms_0032         CDS       T00442                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
mkm  Mycobacterium sp. KMS
Brite
KEGG Orthology (KO) [BR:mkm00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mkm02048]
    Mkms_0032
Enzymes [BR:mkm01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Mkms_0032
Prokaryotic defense system [BR:mkm02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Mkms_0032
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1RH-like_C ResIII T1R_D3-like DEAD VBS_C3G9
Other DBs
NCBI-ProteinID: ABL89251
UniProt: A1U8U3
LinkDB
Position
35811..39137
AA seq 1108 aa
MMARGPEYDYVEKPSMELLAELGWNPVDAFHEILGAEGTLGRDSQHDVILTHRLRLAMRN
LNAEDVPDLSINEAIEALTKDRSVMDRVRANREVYDLLRDGYQAEWEDDNGDKRIELIRY
IDLRDKLNNDLLAVQQMWVKGPLHSRRLDVALFVNGVPLAVLEFKEPNAPVKSAYDDNVT
DYRDTIPQLFIPNCLVLLSNGSEAKVGSTYAPWDFFSDWKVIDAFGARSEIALQTALRGT
CDPANLLDLFESFVAYMERPGGLVKIVARSHQYLGVNAAIENLNRARAVHDKRLGVFWHT
QGSGKSLSMLWFTQKVLRHVRGKWTFVMVTDRTELDTQLHGEFADAGAIPPEARVHADSI
AHLRELLEADHRYVFTLIQKFQPAKGERQMPVLSERSDIIVITDEAHRSQYDTLALNMRT
ALPNASMMGFTGTPLIAGEEQATRQQFGDYVSIYNFGDAIEDGATVPLYYENRIPELQLT
NAEFADELDALLEKAELDEDAEGALARKFGTQYTLLTRPERLQTLAQDLVSHFVGRGFSG
KAMYVGLDKAAAVTMHDLVQDAWAEHLADLRRQHDALPELERPWLASRIELMETTDMAVV
VSQSQNELKMLDDLGLDIRPHRERMNREDLAEKFKDPNDPLRLVFVCAMWMTGFDAPSVS
TIYLDRPMKNHTLMQTIARANRVFPDKDNGLIVDYVGVFRNLEKALAIYGAAKEGESPIE
IIDALADELDTAVADLIAFCAGVGVDLIAVRNAQGFDHVAKRDAAIEALLVDEQTRNDFT
TKARQVRRLYKALLPNPKAAAQQRNVAAIRVLAERIHEVTKPPTPDIGVVADAVDALLDR
SVGAEEYVIRAAAEGSEPDPLIDLSQIDFDGLAARLAGRKRAETDRMAQLLRQQAIGAAM
RNPTRYELVERIEQLIADYNAGSVNIDEYLRRLVELSRTLTSEEERAVREGMTEEELAIF
DLLTQPDPVLTAEERERVQASAKTLLQHLHEKLVQDWRRKVDVMNDVNSTIRRVLDDGLP
ETPYTVDVFREKVQLVYDHVLSAYGDDGESVYTRRVDVGFPPQTAGQVPLGPIDVDRIAD
DVVARIHADPAFAEHVARQLIDRPNAAE
NT seq 3327 nt   +upstreamnt  +downstreamnt
atgatggcaaggggtccggagtacgactacgtcgagaagcccagcatggagttgttggct
gagctcggctggaacccggtcgatgctttccacgaaatcctcggcgccgagggcaccctt
ggacgtgactcccagcacgacgtgattctgacccatcgcctgcgcctagcgatgcggaac
ctaaacgccgaagacgtgccggacctctccatcaacgaggcgatcgaggcgttgaccaag
gaccgttcggtgatggatcgggtccgcgccaaccgtgaggtttacgacctgctgcgcgac
ggataccaggccgagtgggaagatgacaacggcgacaagcgaatcgaattgatccgctac
atcgatctgcgagacaaactgaacaatgacctgctagcggtccagcagatgtgggttaag
ggcccgttgcacagccgtcgcctcgacgtcgccctgttcgttaacggcgtaccgctggca
gtgctggagttcaaggagccgaatgcgccggtcaagtcggcctacgacgacaacgtcacc
gactatcgcgacaccatcccgcagctcttcataccgaactgtcttgtcctgctgtccaat
ggaagtgaggcgaaagttgggtcgacgtatgcgccgtgggacttcttctcggactggaag
gtcattgacgccttcggagcgcgtagtgagatcgcgttgcagacagctctacggggcacc
tgcgatcctgcgaacctgctcgaccttttcgagagcttcgtagcttacatggaacgtccc
ggcggattggtcaagatcgtcgcgcgttcgcatcagtatctcggcgtcaacgctgcgatc
gagaatcttaatcgggcgcgcgctgtgcacgacaaacgcctcggcgtcttttggcatacc
cagggttcgggcaaaagcctgtcgatgttgtggttcacccagaaggtgctccggcacgtc
cggggcaagtggactttcgtaatggttactgacagaaccgaactcgacacgcaactccac
ggagagttcgctgatgccggcgcgatcccgcccgaagcgcgggtccacgcagactccatt
gcgcatctgcgtgaactgttggaggccgaccaccggtacgtcttcacgcttatccagaaa
tttcagccagctaagggtgaacgccagatgccggtcttgtcggagcggtcagacatcatc
gtcatcaccgatgaggcacaccgcagccagtacgacaccctcgcgctcaacatgcgaacc
gcgctgcccaacgcctcgatgatgggctttaccgggaccccactgattgccggcgaagag
caggcgacccgtcagcagtttggtgactacgtcagcatctacaacttcggcgacgccatc
gaagacggcgccacggtccccctctactacgaaaatcgcattcccgagctacaactcacg
aacgccgagttcgccgatgaacttgacgcgctcctggaaaaagccgagctcgatgaagac
gcggagggcgcgctggcacgcaaattcgggacccagtacaccctgctgacccgtcccgaa
cgtttgcagaccctcgcacaagacctcgtttcacacttcgttggccgcggattctcaggc
aaggcaatgtacgtcggcctcgacaaagccgcagccgtgacaatgcacgacctcgtccag
gacgcgtgggccgagcacctcgccgatctgcgacgccagcacgacgcgctgcccgagctg
gagcgtccgtggctggcatcgcggattgagctgatggaaaccaccgacatggcagtcgtg
gtctcccaaagccagaacgaactgaagatgctcgatgacttaggcctcgacatccgaccc
caccgagagcggatgaaccgcgaagacctcgcagagaagttcaaagacccaaacgacccg
ttacggctcgtattcgtgtgcgcgatgtggatgaccggcttcgacgccccgagcgtgtcg
actatctacctcgacaggccgatgaaaaaccacaccctcatgcagaccatcgcccgcgcc
aaccgcgtattcccggacaaggacaacggtctcattgtcgattacgtcggagtcttccgg
aacttggagaaggctctcgccatctacggtgcagccaaggaaggggagtcgcctatcgag
atcatcgatgctctcgcggatgaactcgacactgccgtcgcagatctgatcgccttctgc
gcgggcgtcggcgtcgacttgatcgcagtgcgcaatgctcaaggcttcgaccacgtcgct
aaacgggacgctgccatcgaggcgttgttggttgacgaacagacccgcaacgacttcacg
actaaggctcgacaggtccgccgcctatacaaggcactgctcccaaacccgaaagcggct
gcacagcaacgtaacgtcgctgcgatccgagtgttggccgagcgcatccacgaagtcacc
aagccgccaacacctgacattggagttgtcgccgacgccgtagacgccctgctggatcga
tcggtgggggccgaggagtacgtcatccgcgctgctgccgagggtagcgagccggaccca
ctgatcgacctatcgcagatcgatttcgacggactcgcagcgagactggccggccgcaag
cgcgcagagacggacaggatggctcagcttcttcggcagcaagccatcggcgcggcgatg
cggaacccgacgcgctacgagctggtcgagcgtatcgagcagctgattgctgactacaac
gcgggcagcgtcaatatcgatgagtacctgcgtcgtctcgtcgagctttcaagaacactc
acttccgaagaggaacgagcagtccgcgaaggcatgaccgaggaagaacttgcgatcttc
gacctcctaacgcaacccgatcccgtgctcaccgcggaggaacgagaaagagttcaggcg
agcgcgaagacactgctccaacatctgcatgaaaagctcgtccaggattggcgacgcaag
gtcgacgtgatgaacgacgtcaacagcaccatccgccgcgtactcgacgacggtttaccc
gagacgccatacacagtcgatgtcttccgcgagaaggttcagctcgtatacgaccatgtt
ctgagtgcgtacggagatgacggtgagagtgtgtacacccgacgcgtggacgtcggcttt
ccgcctcagacagcggggcaagtgcctttgggtccgattgatgtagacaggatcgccgat
gacgtcgtggcgcgcatccacgccgatcccgccttcgctgagcacgttgcgcgacagctg
atagaccggccaaacgcagcagaatga

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