Mycobacterium sp. KMS: Mkms_0914
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Entry
Mkms_0914 CDS
T00442
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, alpha subunit
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mkms_0914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_0914
Enzymes [BR:
mkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mkms_0914
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mkms_0914
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
RecD_N
NAT10_TcmA_helicase
UvrD-helicase
AAA_16
PhoH
DUF3322
SH3_13
TraI_hel_assoc_N
AAA_28
nSTAND3
AAA_5
AAA_25
NTPase_1
T2SSE
Mg_chelatase
TrwB_AAD_bind
MukB
SRP54
NACHT
AAA_29
AAA
NPHP3_N
AAA_7
DO-GTPase1
ATPase
CbiA
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ABL90128
UniProt:
A1UBC0
LinkDB
All DBs
Position
complement(997983..999725)
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AA seq
580 aa
AA seq
DB search
MSVGALAVTGLLRAFTDAEVFEPADVHVARRLTDMAKEPDESVALAVAFAVRALRNGSVC
VDLRAVADQVGLPDLPWRDPEAWLTAVRASPLTGTPPVLRLYSGSSGDLLYLDRYWREEQ
QVCDDVLALLESSPPGAVPGLDRLFPTADFPEQRVAAEIALSQSLTVLTGGPGTGKTTTV
ARLLALLAEQASLQNRPPLRIALAAPTGKAAARLLEAVHLQIAGLDAVDRDRLPELTAST
LHRLLQRRRDNASRFRHHRENRLPHDVIVVDETSMVSLTLMARLLEAVRPDSRLLLVGDA
DQLASVEAGAVLADLVDGLGARDDVRIARLVTSHRFGAPIGALAKAIRDGETDTVIGLLR
DGGPDIEWFDTDNPADRLRKVLVPHALRLREAAILGDGPAALATLDEHRLLCAHRRGPYG
VRHWNRQVERWLTDATGEPIWSDWYAGRPLLVTANDYGLRLYNGDTGVTVVRGDGLTAVV
GSGAGPVEFSTSRLADVETVHAMTIHKSQGSQAREVTVLLPDEESRLLTRELFYTAVTRA
KAKVRVVGSEAAVRAAIERRVVRASGLAQRLGGSGRTAST
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcggcgccctcgccgtcaccgggttgctgcgcgccttcaccgacgcggaggtg
ttcgaacccgccgatgtgcacgtcgcgcgccggctcaccgacatggcgaaggaacccgac
gaatccgtcgcgctcgccgtggcattcgcggtgcgcgccctgcgcaacgggtcggtctgt
gtggacctgagggccgtcgcggaccaggtcggattgcccgacctgccctggcgcgacccc
gaggcgtggctgaccgcggtgcgggccagtccgctgaccgggacgccgccggtgctgagg
ctctactccggctcctcgggtgacctgctctacctcgaccgttactggcgcgaagaacaa
caggtgtgcgacgacgtgctcgcgctgctggaatcgtcgccgccgggtgcggtgcccgga
ctcgaccgcctgtttcccaccgccgacttccccgagcaacgcgtcgccgcggaaatcgcg
ctgtcgcaatcacttacggtgctgaccggcggccccggcaccggtaagacgacgacggtg
gcgcggctgttggcgctgctcgccgaacaggcctcgctgcagaaccggccaccgctgcgc
atcgcgctggccgccccgaccggtaaggccgcggcccgcctgctcgaggccgtacacctg
cagatcgccggactcgacgccgtcgaccgtgaccgtctgcccgaactgaccgcctcgaca
ctgcaccggctgctgcagcggcgccgggacaacgcgtcgcggttccgccaccaccgggag
aaccggctgccgcacgacgtgatcgtcgtcgacgagacgtcaatggtgtcgctgacgctg
atggcccggctcctcgaagccgtgcggcccgacagccggttgctgctggtgggcgacgcc
gaccagttggcgtcggtggaggccggggccgtgctggccgacctcgtcgacgggctgggc
gcacgcgacgacgtgcgcatcgcccggctggtcacctcgcaccgcttcggcgcgccgatc
ggggcgctggcgaaggcgatccgcgacggcgagaccgacaccgtgatcgggctgctgcgc
gacggcggccccgacatcgaatggttcgacaccgacaacccggccgaccggttgcgcaaa
gtgcttgtgccgcatgcgctccggctgcgggaggcggccatcctcggggatgggccggca
gcgttggccacgctcgacgaacaccgtctgctgtgcgcgcaccggcgcggaccgtacggc
gtgcggcactggaaccgacaggtcgaacgctggctcaccgacgcgaccggcgagccgatc
tggtcggactggtacgccgggcggccgctgctggtcaccgccaacgattacgggctgcgg
ctctacaacggcgacaccggtgtgacggtcgtgcgcggcgacgggctcacggcggtggtg
ggctcgggcgccgggccggtcgagttctcgaccagccggctcgccgacgtcgagaccgtg
cacgcgatgaccatccacaagagccagggcagccaggcccgggaggtgaccgtgctgctc
cccgacgaggagtcgcggctgctgacccgcgagctgttctacaccgcggtcacccgcgcg
aaggcgaaggtgcgggtggtcggctcggaggcggcggtgcgggcggcgatcgagcggcgt
gtggtgcgggcgtcggggctggcgcagcggctcggcgggtcggggcgcacagcgagcacg
taa
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