Mycobacterium sp. KMS: Mkms_0918
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Entry
Mkms_0918 CDS
T00442
Name
(GenBank) DNA helicase/exodeoxyribonuclease V, gamma subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Mkms_0918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_0918
Enzymes [BR:
mkm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Mkms_0918
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mkms_0918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
ABL90132
UniProt:
A1UBC4
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All DBs
Position
complement(1004538..1007786)
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AA seq
1082 aa
AA seq
DB search
MPFHLHRAERTDLLADGLGALLSTPLADPFAEELVLVPAKGVERWLSQRLSHVLGRGSGD
DGVCAGITFRNPRSLIADITGTRDDDPWAPDSLVWPLLEVIDDNLDQPWCTTLATHLGHF
EHGQEQELRQSRRYAVARRLAGLFASYARQRPGLLVDWLAGNPADLDDDLHWQPHLWRHL
VERVPADPPHIRHAKTVARLHESPSNLPERMSLFGHTRLPSTEVELLDALATHHDLHLWL
PHPSDDLWTTLEPHRGAVRRREDNTHREVGHPLLATLGRDLRELQRSLPDDSQTDEYLGT
ADHPDTLLGWLQSDIAANAVRPDGRRLHDHDRSVQVHSCHGAARQIDVLREVLLGLLVDD
PTLEPRDILVMCPDIEHYAALIVAGFGLGDVIHGAHPAHRLRVKLADRALTQTNPLLGVA
GQLLALAGGRATATEVLNLAEAPSIRARFTFSDDDLDAIGDWVREANIRWGFDREHRHPY
GVDFVQNTWRFGLDRVLAGVAMSDDSHAWLDTTLPLDDVGSDRVELAGRLAEYVDRLQHC
VENLSGTKPLHEWLEALRTGIDQLTAVPDDDTWQTSQLEREFADVLTQAGSRKDTLLRLP
DVKALLDRHLAGRPTRANFRTGTLTVCTMVPMRSVPHRVVCLVGLDDGAFPRLGVVDGDD
ALARDPMTGERDIRSEDRQLLLDAIGAATERLVVTYTGANEYSGQRKPPAVPLVELLDAL
DVTTEAPVRKQILVEHPLQPFDVRNVTPGALGVPGTPFTFDSTALTAATVASGDRAERPG
LLTHPLPAPPEDDVALDDLIGFFKDPVKGFFRALDFTLPWDVDAVQDAMPVEIDALAEWQ
VGERMLDDMLRGLNPEQAQQAEWRRGSLPPGRLGWRKAQELRDQAAALATAAHRHRRQPA
RAYDVDIHLGGGRRVTGTVPKVYGDRTVTVTYSKLDGRHLLASWIQLAALTAQLPGTDWA
AVCIGRPKRGATPRERMLGAPGDATGVLRDLVNMYDAGRREPIPLPPKTSYAWAEARHSR
GDAERESRYRWKSDRYPGEDAEPANVRVWGAHAPLDTLLAAGMDGYAGRLWLPMLEAERD
PD
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgccattccatctgcaccgggcggagcgcaccgacctcctggccgacggactcggtgcc
ctgctgtccactcccctggccgacccgttcgccgaggaactcgtgctcgtcccggcgaag
ggcgtcgagcggtggctgagccagcggctctcgcacgtcctcggccgcggttccggcgac
gacggggtctgcgcgggcatcacattccgcaatccgcggtccctcatcgccgacattacc
ggtacccgggacgacgacccctgggcccccgactcgctggtctggccgctgctcgaggtc
atcgacgacaacctcgaccaaccgtggtgcaccacgctcgccacccacctcggccacttc
gaacacggccaggagcaggaactccgccagagccgccgctacgccgtcgcccgccgcctc
gccggcctgttcgcctcctacgcccgccagcgccccggactgctcgtcgactggctcgcc
ggcaaccccgcagacctcgacgacgacctgcactggcagccgcatctctggcgacacctc
gtcgagcgggtgcccgccgacccgccgcacatccggcacgccaaaaccgttgcccgcctg
catgaatcacccagcaacctgcccgaacgcatgtcgctgttcggccacacccggctgccc
tccaccgaggtcgaactgctcgacgcgctcgccacccaccacgatctgcacctgtggctg
ccgcaccccagcgacgacctgtggaccaccctcgaaccccaccgcggcgccgtgcgccgc
cgcgaggacaacacccaccgcgaggtcggccacccgctgctcgccaccctcggccgcgac
ctgcgcgaactgcagcgcagcctgcccgacgattcgcagaccgacgagtatctgggcacc
gccgaccatcccgacaccctgctcggctggttgcagtccgacatcgccgccaacgcggtc
cgccccgacggccgccgactgcacgaccacgaccgctcggtccaggtgcacagctgtcac
ggcgccgcccgccagatcgacgtcctgcgcgaggtgctgctcggcctgctcgtcgacgac
ccgacgctcgaaccccgcgacatcctcgtcatgtgcccggacatcgagcactacgcagcg
ctgatcgtcgccggcttcggcctcggcgacgtgatccacggtgcgcacccagcgcatcgg
ttgcgcgtcaaactcgccgaccgcgcactcacccagaccaacccgttgctcggcgtcgcc
ggtcaactcctcgcgctcgcgggcggccgcgccaccgccaccgaggtgctcaacctcgcc
gaggccccgtcgatccgggcgcggttcaccttcagcgacgacgacctcgacgcgatcggt
gactgggtacgcgaggccaacatccggtggggtttcgaccgcgagcaccgccacccctac
ggcgttgacttcgtccagaacacctggcgtttcggactcgaccgggtgctcgccggcgtc
gcgatgtccgacgactcgcacgcctggctcgacaccacgctgcccctcgacgatgtcggc
agcgaccgcgtcgaactcgccggccgcctcgcggaatacgtcgaccgactgcagcattgc
gtcgaaaacctcagcggcacaaagccactccacgaatggctcgaagcgctgcgcaccggt
atcgaccagctgaccgcggtccccgacgacgacacctggcagaccagccagctggagcgc
gagttcgccgacgtcctcacccaggccggctcccgcaaggacaccctgctgcgcctaccc
gacgtcaaggccctgctcgaccgccacctcgccggacggcccacccgggccaacttccgc
accggcacgctcaccgtgtgcacgatggtgccgatgcgctcggtcccgcaccgggtggtg
tgcctggtgggtctcgacgacggggcgttcccgcgcctgggcgtggtcgacggcgacgac
gcactggcccgcgacccgatgaccggtgaacgcgacatccgctcggaggaccgccaactg
ctgctcgacgcgatcggcgcggcgacggagaggctggtcgtcacctacaccggcgccaac
gagtactccgggcagcgcaaacctccggcggtgccgctggtcgaactgctcgacgcgctc
gacgtcaccaccgaggccccggtgcgcaagcagatcctcgtcgaacatccgttgcagccc
ttcgacgttcgcaacgtcactccgggcgcgctaggggtgcccggcacaccgttcacgttc
gactcgacggcgctgaccgccgcgaccgtcgcgtccggggaccgcgccgagcggccgggt
ctgctcacccatccgctgcctgcgccaccggaggacgacgtcgcgctcgacgatctgatc
ggcttcttcaaggatccggtcaaggggttcttccgggcgctggacttcacgctgccgtgg
gacgtcgacgccgtccaggacgccatgccggtggagatcgacgcgctggccgaatggcag
gtcggcgaacggatgctcgacgacatgctgcgcggcctcaatcccgaacaggcgcaacag
gcggagtggcggcgcgggtcgctgccacccggccggctcggctggcgcaaggcgcaggag
ttgcgcgatcaggccgccgcgctggccaccgcggcgcaccggcaccgacggcaaccggcc
cgggcgtatgacgtcgacatccacctcggtggcggccggcgcgtcaccggcacggtcccg
aaggtgtacggcgaccgcacggtcaccgtcacgtactccaaactcgacggccgccacctg
ctggcgtcgtggatccagttggcggcgttgaccgctcaacttcccggtacggactgggcg
gcggtgtgtatcggccggccgaagcgtggcgccaccccgcgggaacggatgctcggcgcg
cccggggatgccaccggtgtgctgcgcgatctggtgaacatgtacgacgcggggcgccgt
gagccgataccgctgccgccgaagacgtcctatgcgtgggccgaggcgcgtcacagtcgt
ggagacgcggagcgcgagtcgcgataccgctggaagtcggaccgctacccgggtgaggac
gccgaaccggccaacgtacgggtgtggggggcgcacgccccgctggacaccctgctcgcg
gcgggcatggacggctacgccggacgcctgtggctgccgatgctggaagccgagagggac
cccgactga
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