Mycobacterium sp. KMS: Mkms_3057
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Entry
Mkms_3057 CDS
T00442
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mkm
Mycobacterium sp. KMS
Pathway
mkm03030
DNA replication
mkm03410
Base excision repair
mkm03420
Nucleotide excision repair
mkm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mkm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mkms_3057
03410 Base excision repair
Mkms_3057
03420 Nucleotide excision repair
Mkms_3057
03440 Homologous recombination
Mkms_3057
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mkm03032
]
Mkms_3057
03400 DNA repair and recombination proteins [BR:
mkm03400
]
Mkms_3057
Enzymes [BR:
mkm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Mkms_3057
DNA replication proteins [BR:
mkm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Mkms_3057
DNA repair and recombination proteins [BR:
mkm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Mkms_3057
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mkms_3057
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
DNA_pol_A_exo1
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
ABL92251
UniProt:
A1UHE3
LinkDB
All DBs
Position
complement(3199074..3201836)
Genome browser
AA seq
920 aa
AA seq
DB search
MSAGVHRVEPVSPASTSTDKKTATSQKADDKPTLMLLDGNSLAYRAFYALPAENFKTQGG
LTTNAVYGFTAMLINLLRDEQPSHVAAAFDVSRQTFRVDKYPEYKAGRSSTPDEFRGQID
IAKEVLVALGIAVLAEPGFEADDIIATLATQAEGEGYRVLVVTGDRDALQLVSDDVTVLY
PRKGVSDLTRFTPDAVQEKYGLTPQQYPDFAALRGDPSDNLPGIPGVGEKTATKWIAEYG
SLQALVDNVDQVKGKVGDALRANLSHVVLNRELTDLVKDVPLPHTPDTLRVQPWDRDQLH
RLFDDLEFRVLRDRLFETLAAVEPEVEHGFDVRGKALERGELAAWLSEHSLGNRFGLAVV
GTHLAYDADATALAIVAADGDGRYIDTTSLDPDDEAALASWLADPGPPKALHEAKLAMHD
LAGRGWKLAGVTSDTALAAYLVRPGQRSFSLDDLSLRYLRRELRADNPAQQQLSLLDDSD
GGDDQAVQTLILRAVAVLDLADALDEELARIDSSSLLGRMELPVQRVLAEMEHTGIAVDI
DQLRQLQSEFADLIRDAAEAAYAVIGKQINLGSPKQLQAVLFDELEMPKTKRTKTGYTTD
ADALQSLFDKTGHPFLQHLLAHRDATRLKVTVDGLLNSVASDGRIHTTFNQTIAATGRLS
STEPNLQNIPIRTEAGRRIRDAFVVGDGYTEVMTADYSQIEMRIMAHLSQDAGLIEAFNT
GEDLHSFVASRAFDVPIDEVTPDLRRRVKAMSYGLAYGLSAYGLAAQLKISTEEAKVQMD
QYFARFGGIRDYLRDVVDQARKDGYTSTVFGRRRYLPELDSSNRNVREAAERAALNAPIQ
GSAADIIKVAMIDVDQAIKDAGLSSRMLLQVHDELLFEVADGERDTLEKLVRDKMGSAYA
LDVPLEVSVGYGRSWDAAAH
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
gtgtcggcgggggtgcatagagttgagcccgtgagcccagccagcacctcgaccgacaag
aagacggccaccagccagaaggcggacgacaagccgacactgatgctgctggacggcaac
tcgctggcgtaccgcgccttctacgcactccccgccgagaacttcaagacccagggcggc
ctgaccaccaacgcggtctacggattcaccgcgatgctgatcaacctgctccgcgacgag
cagccctcccatgtggccgccgcgttcgacgtctcccggcagacgttccgcgtcgacaag
tacccggagtacaaggccggccgctcgtcgactccggacgagttccgcgggcagatcgac
atcgccaaggaggtgctcgtcgcgcttggcatcgccgtgctggccgaacccggcttcgag
gccgacgacatcatcgccacgctcgccacccaggccgagggtgagggttaccgggtgctc
gtcgtgaccggtgaccgcgacgcgctccagctcgtcagcgacgacgtgacggtgctctat
ccccgtaagggcgtcagcgacctgacccgcttcacgcccgacgcggtgcaggagaagtac
gggctgacgccgcagcagtacccggacttcgccgcgctgcggggcgatccgagcgacaac
ctgcccggcatcccgggcgtgggggagaagacggcgaccaagtggatcgccgagtacggg
tcgctgcaggccctggtggacaacgtcgaccaggtcaagggcaaggtcggcgatgctctg
cgggccaacctgtcccacgtggtgctcaaccgcgaactcaccgacctcgtcaaggacgtc
ccgcttccgcacactcccgacaccctgcgggtgcagccgtgggaccgcgatcagctccac
cggctgttcgacgacctcgagttccgggtgctgcgcgaccgcctgttcgagactctggcg
gccgtcgaacccgaggtcgaacacggcttcgacgtgcggggcaaggcgctcgaacggggt
gaactcgcggcctggctgtccgaacacagcctcggcaaccggttcgggctcgcggtcgtc
ggcacccatctcgcctacgacgccgacgccaccgcgctggccatcgtcgccgccgacggc
gacggtcgctacatcgacacgacctcgctcgacccggacgacgaggcggcgctggcgtcg
tggctggccgacccgggcccgccgaaggcgctgcacgaagccaagctcgccatgcacgac
ctcgccggtcgcggctggaagctcgccggggtcacctccgacacggcgctggccgcctac
ctggtgcggcccgggcagcgcagcttcagcctcgacgatctgtcgctgcgctacctgcgt
cgggaactgcgcgcggacaaccctgcgcaacaacaactctcactgctcgacgacagtgac
ggcggcgacgaccaagccgtccagacgctgatcctgcgggccgtggcggtgctcgacctc
gccgacgcgctcgacgaggaactcgcccgcatcgactcgtcgtcgctactgggccggatg
gagttgccggtgcagcgggtgctcgccgagatggagcacaccggtatcgccgtcgacatc
gatcaactgcggcagttgcagagcgagttcgccgacctgatccgcgatgccgccgaggcg
gcctacgcggtgatcggcaagcagatcaacctcggctcgcccaaacagctgcaggcggtg
ctgttcgacgaactcgagatgcccaagactaagcggaccaagaccggatacaccacggat
gccgatgcactgcagtcgttgttcgacaagaccggtcatcctttcctgcagcatctgctg
gcccatcgcgacgccacccggctcaaggtgaccgtcgacggcctcttgaactccgtcgcc
tccgacggccgtatccacacgacgttcaaccagacgatcgccgcgaccggtcggctgtcg
tcgaccgaaccgaatctgcagaacatcccgatccgcaccgaggcgggccggcgtatccgc
gacgccttcgtggtcggagacggatacaccgaagtcatgaccgccgactacagccagatc
gagatgcgcatcatggcgcacctgtcacaggacgccggtctgatcgaggcgttcaacacc
ggagaggacctgcactcgttcgtcgcctcgcgcgcgttcgacgtgccgatcgacgaggtg
accccggacctgcgccgccgggtcaaggcgatgtcgtacgggttggcctacgggctgagc
gcgtacggattggccgcgcagctcaagatctccaccgaagaggccaaggtccagatggac
cagtacttcgcccgtttcggcggtatccgcgattacctgcgcgacgtcgtcgaccaggcc
cgcaaggacggctacacctcgacggtgttcggtcgcaggcggtatctgcccgaactcgac
agcagcaaccgcaacgtccgcgaggccgcggagcgggccgcgctcaacgccccgatccag
ggcagcgccgcggacatcatcaaggtcgcgatgatcgacgtcgatcaggcgatcaaggac
gccggcctctcgtcacggatgctgctgcaggtgcacgacgagttgctgttcgaggtcgcc
gacggcgagcgcgacacgctcgagaagctggtccgcgacaagatgggcagcgcgtacgcc
ctcgacgttccgctcgaggtcagtgtcgggtacggccggagctgggacgcggcggcgcac
tga
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integrated database retrieval system
